Pseudodesulfovibrio cashew: GM415_00655
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Entry
GM415_00655 CDS
T06353
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel00061
Fatty acid biosynthesis
psel00071
Fatty acid degradation
psel01100
Metabolic pathways
psel01212
Fatty acid metabolism
psel02024
Quorum sensing
psel04146
Peroxisome
Module
psel_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GM415_00655
00071 Fatty acid degradation
GM415_00655
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GM415_00655
09145 Cellular community - prokaryotes
02024 Quorum sensing
GM415_00655
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psel01004
]
GM415_00655
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psel04147
]
GM415_00655
Enzymes [BR:
psel01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GM415_00655
Lipid biosynthesis proteins [BR:
psel01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GM415_00655
Exosome [BR:
psel04147
]
Exosomal proteins
Exosomal proteins of breast milk
GM415_00655
Exosomal proteins of breast cancer cells
GM415_00655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Spectrin_7
Apolipoprotein
AMP-binding_C
Spectrin
Motif
Other DBs
NCBI-ProteinID:
QGY41938
UniProt:
A0A6I6JLQ1
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All DBs
Position
complement(149362..151173)
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AA seq
603 aa
AA seq
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MTLKDLLERSVQRHSERPALGFVRGEPFSYAGLLEKVHEFQEILAECGVAAEDKVAIIGE
NMPNWAVAYFAAVSMGAVAVPILQEFHPSAVHHILRHSEAKVVVASSRYMDKVEGENFPR
LKTVVRMNDFSIVNDDEDEVEAEEPQASGFAEAVDMAREKLEILSDRARKLTDRMDEETM
KKVSEAVESAREKFEELGDRARKLIDRKGVVKDVELTPDSVAAILYTSGTTGHSKGVVLT
HRNLVSNALAGLEVFPVKEDDRFLSVLPMAHTYECTVGLIIPIHCGSSVYYLEKPPTPKT
LLPAMQKVRPTIINVVPLIIEKIYKKRIKPKLNRKGVVGSLLKIGAARRKAARIAGSKLI
EAFGGDLRLMCIGGAALAPEVERFLCDAEVPHAIGYGMTETAPLLAGIGPDKQRFRAIGP
SIPGVELKILDPDPETGEGEILAKGPNVMREYYKAPKDTAATFTEDGWLLTGDLGVIDED
GYLFIKGRLKNVIIGPSGENIYPEEVESIINTCDLVMESLVYEVEGKVMARVHLNYDALD
EQFDVSRMIESDVRDKVEGILEEIRNEVNGKVSTFARLARITEQVDPFEKTPTQKIKRFI
YLN
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacattgaaggacctgctcgagcgctcggtccagcgccactcggagcggcccgctctc
ggcttcgtgcgcggggaacccttctcctacgcaggactgttggagaaggtgcacgaattc
caggagatccttgccgaatgcggtgtggccgccgaggacaaggtcgccatcatcggggag
aacatgcccaactgggcagtggcctattttgccgctgtttccatgggggccgtggccgtc
cccatcctgcaggagttccaccccagcgcggtgcatcacatcctccggcactccgaggcc
aaggtagtggtcgcgtccagccgctacatggacaaggtggagggagagaatttcccgcgc
ctgaagaccgtggtgcgcatgaacgatttttccatcgtcaatgacgacgaggatgaggtc
gaggccgaggagccgcaggcatcgggatttgccgaggccgtggacatggcccgcgagaaa
ctcgaaatcctcagcgaccgggcgcgcaagctgaccgaccgcatggacgaggagaccatg
aagaaggtttccgaggccgtggagtcggcgcgcgagaagttcgaggagctgggtgaccgg
gcgcgcaagctcatcgaccgcaagggagtggtcaaggacgtggagctgacgcccgacagc
gtggccgccatcctctacacctcgggcaccaccggccattccaagggagttgtcctgacc
caccgcaacctggtctccaatgcgctggcagggcttgaagtcttccctgtgaaagaggac
gaccgtttcctttccgtcctgcccatggcccatacctacgagtgcaccgtggggctgatc
atcccgatccactgcggcagctcggtctactacctggagaaaccgccgactcccaagacc
ctgctcccggccatgcagaaggtccgcccgaccatcatcaacgtggtgcccctgatcatc
gaaaaaatctacaagaaacggattaagcccaagctcaaccgcaagggagtggtcggcagc
ctgctcaagatcggcgcggcccgccgcaaggccgcacgcattgccgggagcaagctcatc
gaggcctttggcggcgatttgcgcctgatgtgcatcggtggcgcggccctggccccggag
gtggagcgcttcctgtgcgacgcggaagtgcctcacgccatcggctacggcatgaccgag
accgcaccgctgctggcgggcatcggtccggacaagcagcgtttcagagccatcgggccg
agcatcccgggagtggagctcaaaatcctcgatcccgatccggagaccggcgagggtgag
atcctggccaaggggcccaacgtcatgcgggaatattacaaggcgcccaaggacacggcc
gcgaccttcaccgaggacggctggctgctgaccggcgacctcggggtcatcgacgaggac
ggctacctcttcatcaaggggcggctcaagaacgtcattatcgggcccagcggggagaac
atctaccccgaggaagtggagtcgatcatcaacacctgcgatctcgtcatggagtcgctg
gtctacgaggtcgagggcaaggtcatggcccgcgtccatctcaattacgacgccctggac
gaacagttcgacgtgtccaggatgatcgagtccgacgtccgcgacaaggtggagggaata
ctcgaggagatccgaaacgaggttaacggcaaggtctccacctttgcccgcctggcccgt
atcacggaacaggtggaccccttcgagaagacgcccacccagaagatcaagcgcttcatt
tatctcaactag
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