Pseudodesulfovibrio cashew: GM415_01520
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Entry
GM415_01520 CDS
T06353
Symbol
recA
Name
(GenBank) recombinase RecA
KO
K03553
recombination protein RecA
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GM415_01520 (recA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psel03400
]
GM415_01520 (recA)
DNA repair and recombination proteins [BR:
psel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GM415_01520 (recA)
RecFOR pathway proteins
GM415_01520 (recA)
TLS (translesion DNA synthesis) factors
Other SOS response factors
GM415_01520 (recA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
ATPase
Rad51
ATPase_2
AAA_24
AAA_25
CobU
AAA
AAA_16
CLP1_P
ABC_tran
AAA_35
NPHP3_N
MobB
AAA_14
DnaB_C
nSTAND3
AAA_18
AAA_22
CbiA
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QGY38871
UniProt:
A0A6I6JA02
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All DBs
Position
343911..344963
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AA seq
350 aa
AA seq
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MARKAVDPEVLRKEALGTALTTIERKFGKGSIMRLDDEASHSIPFIPTGSIGLDMALGIG
GVPRGRVIEIYGPESSGKTTLALHIVAEAQKRGGNAAFVDAEHALDPGYAKRLGVKTDEL
LISQPDYGEQALEIADLLVRSGAMDVVVIDSVAALIPQAELEGQMGETQVGGQARLMSHA
LRKLTGTIHKSNCVVIFINQIRMKIGMTGYGNPETTSGGNALKFYASCRLDIRRIQTLKD
KDESYGIRARIKVVKNKVAPPFREALVDVLYGQGISRMGELIDMGVEHGIIEKSGSWFAF
GPEKLGQGKENVRQLLQENPDIAEAVEEKLMQHLGYREAPEAEEAGDAGE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtaaggccgtcgaccccgaagtcctgagaaaggaagctctcggcaccgctctg
accaccatcgaacgcaagttcggcaaggggtccatcatgcggctcgacgacgaggcgtcg
cactccattccgttcatccccaccggttccatcggcctggacatggcccttggcatcggc
ggcgtaccgcgtggacgcgtcatcgaaatttatggtccggaatcctcgggcaagacaacc
ctggccctgcacatcgtggccgaggcccagaagaggggcggcaacgctgccttcgtggac
gccgagcacgccctggacccgggttacgccaagcgcctcggcgtcaagacagacgaactg
ctcatctcccagccggactacggcgaacaggccctggagatcgccgacctgctggtccgc
tccggcgccatggacgtggtggtcatcgactcggtggccgccctcatcccccaggccgag
cttgagggccagatgggcgagacccaggtgggcggccaggcgcggctcatgtcccacgcc
ctgcgcaagctgaccggcaccatccacaagtccaactgcgtggtcatcttcatcaaccaa
attcgtatgaagatcggcatgaccggctacggcaaccccgagactacctcgggcggcaac
gcgctcaagttctacgcctcctgccgcctggacatccgccgcatccagaccctcaaggac
aaggacgagtcctacggcatccgcgccaggatcaaggtggtcaagaacaaggtggccccg
cccttccgcgaggccctggtggacgtgctctacggccagggaatctcccgcatgggcgag
ctcatcgacatgggcgtggagcacggcatcatcgagaagtccggctcctggttcgccttc
ggtcccgagaagctcggccagggcaaggagaacgtccggcaactgttgcaggaaaacccg
gacatcgccgaggccgtcgaggaaaaactgatgcagcatctgggataccgcgaggccccg
gaagctgaagaagccggagacgccggcgaatag
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