Pseudodesulfovibrio cashew: GM415_01790
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Entry
GM415_01790 CDS
T06353
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GM415_01790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psel02000
]
GM415_01790
Transporters [BR:
psel02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GM415_01790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QGY38919
UniProt:
A0A6I6JCP8
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All DBs
Position
398914..400131
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AA seq
405 aa
AA seq
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MKLMTNLFLLVFLLTACAGEPPKEDGKALLSEDWQTIETAAKGSTVRFYMYGGFAHVNNW
IDTFVAKEVKDRFGITLVRVPMDAGVFVNKLLTEKSAGKKVGSIDLLWINGENFKTTKEA
DTLFGPFADKLPNYVKYVDKGLAANDFGYPVEGYEAPYGKAQFVFEFDPAKTPDHPASFE
ALTDWVKAHPGQFTYPQPPDFTGSAFIRQAFYAVTGGADQYLHGWSQDLFDEQAPKLWAY
LNGLKPYLWQQGRSYPKGSAEMDTLFERGELAVNMSYHPLHAQSKILDGSYAKTVRTFVL
AEGAIFNLHFTAIPANAPNKAGAMVVANFLLSPEAQLSKFNPANWGDFPAIETQTLTTDE
QAAFRQVDLGEATLPLSELGKAAVPEIPAEYLEALEKGWEEHVLR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgatgaccaaccttttccttctcgtctttctgctgacagcctgtgccggggaa
ccgcccaaggaagacggcaaggccctgctctccgaagattggcagaccattgagaccgca
gccaaggggagcacggtccgtttctacatgtacggcggcttcgcccatgtgaacaactgg
atcgacactttcgtggcgaaagaggtgaaggaccgcttcggcatcactctggtccgcgtg
cccatggatgccggggttttcgtcaacaagctgctcacggaaaagagcgccgggaagaaa
gtcggctccatagacctgctctggatcaacggagaaaatttcaagacgaccaaggaggcg
gacaccctgttcggcccctttgcagacaagctgcccaactatgtaaaatacgtggacaag
gggctcgccgccaacgacttcggctacccggtcgagggctacgaggccccctatggcaag
gcgcagttcgtctttgaattcgatccggcaaagaccccggaccatccggcgagcttcgaa
gcgttgaccgactgggtcaaggcccaccccggccagttcacctacccccaacccccggac
ttcaccggctcggccttcatccgccaggccttctacgccgtcaccggcggcgcggaccag
tacctgcacggctggagccaggacctgttcgacgagcaggctcccaagctctgggcgtac
ctgaatggactcaagccctacctctggcagcaggggcgctcctatcccaaggggtccgcc
gagatggacaccctgttcgagcggggcgaactggccgtgaacatgtcttaccacccgctg
cacgcccaatccaaaatcctcgacggctcctacgccaagacagtccgcaccttcgtcctt
gccgaaggagccattttcaacctccacttcaccgccattccggccaacgcgcctaacaag
gccggagccatggtggtggccaatttcctgctctcccccgaggcgcagctctccaagttc
aatccggccaactggggcgacttcccggccattgagacgcaaaccctgaccacggacgag
caggccgcgttccgacaggtggacctgggcgaggccaccctgcccctgagcgaactcggc
aaggcggcggtccccgaaatccctgcagaatacctcgaagcgctggaaaaggggtgggag
gagcatgtgctcaggtag
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