Pseudodesulfovibrio cashew: GM415_02055
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Entry
GM415_02055 CDS
T06353
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM415_02055 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psel03019
]
GM415_02055 (groL)
03110 Chaperones and folding catalysts [BR:
psel03110
]
GM415_02055 (groL)
03029 Mitochondrial biogenesis [BR:
psel03029
]
GM415_02055 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psel04147
]
GM415_02055 (groL)
Enzymes [BR:
psel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GM415_02055 (groL)
Messenger RNA biogenesis [BR:
psel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GM415_02055 (groL)
Chaperones and folding catalysts [BR:
psel03110
]
Heat shock proteins
HSP60 / Chaperonin
GM415_02055 (groL)
Mitochondrial biogenesis [BR:
psel03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GM415_02055 (groL)
Exosome [BR:
psel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GM415_02055 (groL)
Exosomal proteins of other body fluids (saliva and urine)
GM415_02055 (groL)
Exosomal proteins of breast cancer cells
GM415_02055 (groL)
Exosomal proteins of colorectal cancer cells
GM415_02055 (groL)
Exosomal proteins of bladder cancer cells
GM415_02055 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
QGY38968
UniProt:
A0A6I6JD19
LinkDB
All DBs
Position
456720..458306
Genome browser
AA seq
528 aa
AA seq
DB search
MAKAIDYKAVAREGMQKGVNILADAVKVTLGPKGRNVMLEKTWGAPQVTKDGVTVAEKID
LEDKLENMGAQMVKEVASKTNEIAGDGTTTATILSQAIFNEGVKLLAAGRNPMSIKRGID
LAVENVVAELEKLAKPVKKSSEIAQVGAISANNDAAIGEILAVAVDKVGNNGVITVEESQ
GLSIELDVVEGMQWDNGWLSPYFVTDQDKQEAVFENPFILLSEGKISNIKPLVPILEAVA
KAGRPLLVIAETVENEALAGLTINAMRGALKVCAVKAPGFGDRRKEMIRDIGIMTGAGVV
SEDTAVTLESIRPEDFGTAKKVVISKKNTLIVGGAGDKEAIDRRCEEISNMAANATSEYD
REKLQERLAKLVGGVAVVKVGAPTEVEMKERKDRVEDALNATRAAVDEGIVPGGGTALVR
AGKGLAKLKGANDTEQAGIAIIARAIEEPLRQIANNCGLEGTVVVEKVKNLKGANGFNAA
TGEYVDLVKEGVIDPKKVTRIALQNAASVSSMLLTTECAISEAVEEDD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaatcgattacaaggctgtcgcccgcgagggcatgcagaaaggcgtcaac
atcctggccgacgccgtcaaggtcacccttggccccaagggccgcaacgtcatgctggaa
aagacctggggcgctccccaggtgaccaaggacggcgtgaccgtcgccgagaagatcgac
ctcgaggacaagctcgagaacatgggcgcccagatggtcaaggaagtcgcttccaagacc
aacgagatcgccggtgacggcaccaccaccgccaccatcctttcccaggccatcttcaac
gagggcgtgaagctgctggccgccggccgtaaccccatgtccatcaagcgcggcatcgac
ctcgccgtggaaaacgtggtagccgagctggagaagctggccaagcctgtgaagaagagc
tccgagatcgcccaggtcggcgccatctccgccaacaacgacgccgccatcggcgagatc
ctggccgtggccgtggacaaggtcggcaacaacggcgtcatcactgtcgaagagtcccaa
ggcctgtccatcgaactggacgtggtcgaaggcatgcagtgggacaacggttggctctcc
ccctatttcgtcactgatcaggacaagcaggaagcggtcttcgaaaacccgttcatcctc
ctgtccgaaggcaagatttccaacatcaagcccctggtgcccatcctggaggccgtagcc
aaggccggtcgccccctgctggtcatcgccgagaccgttgagaacgaggccctggccggc
ctgaccatcaacgccatgcgcggcgccctcaaggtctgcgcagtcaaggcccccggattc
ggcgatcgccgcaaggaaatgatccgtgacatcggcatcatgaccggcgcgggcgtggtt
tccgaggacaccgccgtgaccctggaatccatccgccccgaagacttcggcaccgccaag
aaggtcgttatctccaagaagaacaccctcatcgtgggcggcgcaggcgacaaggaagcc
atcgaccgccgctgcgaggagatcagcaacatggctgccaacgccaccagcgagtacgac
cgcgaaaagctgcaggaacgcctggccaagctggtcggcggcgttgccgtggtcaaggtc
ggcgctcccaccgaagtggagatgaaggagcgcaaggaccgcgtggaagacgccctgaac
gccacccgcgccgccgttgacgaaggcatcgtgcccggcggcggcaccgccctggtgcgc
gccggcaagggcctggccaagctcaagggtgccaacgacaccgagcaggccggcatcgcc
atcatcgcccgggccattgaggagcccctccgccagatcgccaacaactgcggcctggaa
ggcaccgtggtggtggaaaaggtcaagaacctcaagggcgccaacggcttcaatgccgcc
accggcgagtacgtcgacctagtcaaggaaggcgtcatcgatcccaagaaggtgacccgt
atcgccctgcagaacgccgcctcggtctcctccatgctgctgaccaccgagtgcgccatc
tccgaagccgtcgaagaagacgactag
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