KEGG   Pseudodesulfovibrio cashew: GM415_04370
Entry
GM415_04370       CDS       T06353                                 
Name
(GenBank) HD domain-containing protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
psel  Pseudodesulfovibrio cashew
Pathway
psel03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GM415_04370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psel03019]
    GM415_04370
Enzymes [BR:psel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     GM415_04370
Messenger RNA biogenesis [BR:psel03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     GM415_04370
SSDB
Motif
Pfam: HD tRNA_NucTran2_2 PolyA_pol_RNAbd MIOX wHTH-PRTase_assc CNV-Replicase_N
Other DBs
NCBI-ProteinID: QGY39387
UniProt: A0A6I6JH32
LinkDB
Position
990771..992105
AA seq 444 aa
MSQPFKDAVGFCKTIMRNGFDAYVVNVRLQALTLSEAGNEKELDICTDAGLAELQKYFPS
LTASDDKGIVGFLTEGDTTYYFYAADVDDASHLSEAISTMTPRLLKRLEQRGDIPLSAVC
PFIPKAKDTYADFADFAEGRIRFKGDPDQALKKDYSLAYRALRFAANFDKEIAPNSWTAI
VRNAPQVLEFVPMADFLDEWHKVEAESMYRFFALLFDSMLLHGLIPEIAALSRIKQIRNP
EEGAEETVLQHTLDVMKAYPEELPYDWKGTVACLFHDLGKLYTAEYYDEQWHFLQHHRVG
AKAARQVLKRLRFEEQDIDLICDLVQNHMRPHFMLTDKGIRRLRSLDEYPRIMEMVKADI
KARDGSWREYNHNLKMAERADIPDNEIEPMLDGNQIMEMTELNPGPVIGEIRQQLLKAQI
AGSVNSMEEAEAFVHTYVAKNKIQ
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagtcagcctttcaaagacgcggtaggattttgcaagaccatcatgcgcaacggcttt
gacgcctacgtggtcaacgtccgtttgcaggcgcttaccttgagcgaagccggcaatgaa
aaggagctggacatctgcaccgacgccggcctggcggaattgcagaagtatttccccagc
ctgacggcttccgacgacaagggtatcgtcggattcctgaccgagggcgacaccacctat
tatttctacgccgccgacgtggacgacgcctcgcacctgagcgaggccatctcgaccatg
actccccggctgctcaagcggctggaacagcgcggtgacattccgctctcggcggtctgc
ccgttcatccccaaggccaaggacacctatgcggacttcgctgacttcgccgaaggcaga
atccgcttcaagggcgacccggaccaggcgctgaaaaaggactattccctggcctaccgg
gccctgcgcttcgccgcgaacttcgacaaggagatcgcgcccaactcctggacggccatc
gtacgcaatgcgccgcaggtcctggagttcgtgcccatggccgactttctggacgagtgg
cacaaggtcgaagcggagtccatgtaccgcttcttcgccctgcttttcgattccatgctg
ctgcacggcctgatcccggagatcgcggccctgtcgcggatcaagcagatccgcaacccc
gaggaaggagccgaggagaccgtgctccagcacaccctggacgtcatgaaggcctacccc
gaggagctgccctacgactggaagggcaccgtggcctgcctcttccacgacctcggcaaa
ctctacacagccgaatattatgacgagcagtggcacttcctgcagcaccaccgggtcggg
gccaaggccgcccgccaggtgctcaagcgactgcgcttcgaggagcaggacatcgacctg
atctgcgatctggtccagaaccacatgcgcccgcacttcatgctcacggacaagggcatc
cggcgactgcgctccctggacgaatatccgcgcatcatggagatggtcaaagcggacatc
aaggcccgcgacggctcctggcgcgagtacaaccacaacctgaagatggccgagcgcgcc
gacatcccggacaacgagatcgaacccatgctcgacggcaaccagatcatggaaatgacc
gagctcaatcccggcccggtcatcggcgaaatccgccagcagttgctcaaggcccagatc
gccggttcggtcaactccatggaagaggccgaggcctttgtccacacgtacgtggccaag
aacaagattcagtag

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