Pseudodesulfovibrio cashew: GM415_04405
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Entry
GM415_04405 CDS
T06353
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
GM415_04405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
RNase_H_2
WHD_HRQ1
DNA_pol_B_exo2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QGY41982
UniProt:
A0A6I6JP22
LinkDB
All DBs
Position
complement(999096..1001924)
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AA seq
942 aa
AA seq
DB search
MAHQVAHHRILDGADSRYAEPRRPLSAPLRHALSLMGIERLYSHQAEAADYVRAGRHVVA
ATPTASGKTLTYNLPVMERCLADPEAKALYLFPLKALAQDQLKAFNELAALLPEERRPTA
AIYDGDTSPHFRKKIRNSPPNVILSNPEMVHLSMLPHHASWAEFLSGLTHIVVDEVHTYR
GVMGSHMAMVFRRLLRLCEYYGAHPTFVFCSATIGNPVELCHLLTGLEVHPILESGAARG
GRHMIFLNPDGSPAQAAIQLLQAALARDLRTIVYCQSRKLTELIALWAAEKSGKYKGRIS
AYRAGFLPEERREIEMRMADGDLLAVISTSALELGIDIGGLDVCIMVGYPGSVMATHQRG
GRVGRSTRDSVVALVAQEDALDQYFMRNPDDFFSRPPESAMLNPYNPVIMDRHLVCASAE
LTLRRAETFLREPDIETRVEELVERGVLFEVAGDLPGHAAEIVSHRKRPHREVDLRGAGR
SLHIEDNTQGGKAPVIGTIDEFRAYRETHPGAVYLHRGETYVVTDLDLGAKAVRSVRQRV
GYYTKVRGSKSTDILEVLGQKACFGTRVYFGRLRVTEQITGYEKRSVRGGKLLGITPLDL
PPLVFETEGVWFEVGHEIRRRCEDEFLHFMGGIHAFEHAAIGMLPLLVMTDRNDLGGIST
PMHPQVDGPAVFIYDGMPGGAGLTRQAFDKAGELVETTLRTITGCECELGCPSCVHSPKC
GSGNRPIDKRAAQFVLEAILHGDPKAIEPKDIDVNLPGIDLKRPAPKRYGVLDIETRYSA
DEVGGWNRADRMGVSIACVYDSEDGAMHDYEQDRMDDLVSHLKDFDLVIGFNHVKFDYAV
LGGLHPFNFRSLPNLDLLVEINNRLGYRLKLDNVAQATLDIGKSADGLQALKWWKEGRLD
LITEYCRQDVAVTRDVYLFGRENGHVFFTNKAGQKVKLPVDW
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcaggtggcgcaccatcgaattctggatggcgcggactcccggtatgccgag
cctcgtcgtccgctgagcgcgcccctccgtcacgccctttcgctcatgggcatcgagcgg
ctctactcccatcaggccgaggccgccgactacgtgcgcgccggacgccacgtggtggcc
gccacgcccacggcctcgggcaagaccctgacctataacctgccggtcatggagcgttgt
ctggccgaccccgaggccaaggccctctatctctttccgctcaaggccctggcccaggac
cagctcaaggcgttcaacgaactggccgccctcctcccggaggagcgccgccccacggcc
gccatctacgatggggacacctcgccgcattttcgcaagaagatccgcaactcgccgccc
aacgtcatcctgtccaacccggagatggtccacctgtccatgctcccccaccacgcctcc
tgggccgagttcctgtccggcctgacccacatcgtggtggacgaagtgcatacctaccgg
ggcgtcatgggctcgcacatggccatggtcttccgccgtttgctccggctgtgcgaatac
tacggcgcgcaccccaccttcgtcttctgctcggccaccatcggcaaccccgttgagctc
tgccacctgcttaccggcctggaggtccaccccatcctcgaatcgggcgcggccaggggc
gggcggcacatgatttttctcaacccggacggctccccggctcaggccgcgatacagctt
cttcaggccgccctggcccgggatctgcgcaccatcgtctattgccagtcgcgaaagctg
accgaactcatcgccctgtgggccgccgaaaagagcggcaagtacaaggggcgtatctcc
gcctaccgcgccggattcctgcccgaggagcggcgcgagatcgagatgcgcatggccgac
ggggacctgctggcggtcatctccacctcggccctggagctgggcatcgacatcggcggc
ctcgacgtctgcatcatggtcggctaccccggctcggtcatggccacccaccagcgcggc
ggtcgggtggggcgttcgacgcgcgactccgtggtcgccctggtagcccaggaggacgcc
ctggaccagtatttcatgcgcaatccggacgatttcttctcccgtccgcccgagtcggcc
atgctcaacccgtacaacccggtgatcatggaccgccacctggtctgcgcgtccgccgag
ctgaccctgcgtcgggccgagaccttcctgcgcgagccggacatcgaaacccgcgtggag
gagctggtggagcggggcgtgctcttcgaagtggcgggcgacctgcccggccacgccgcc
gagattgtctcccaccgcaaacggccgcatcgggaagtggacctgcgcggcgctggccgc
tctctgcacatcgaggacaatacccagggcggcaaggctcctgtcatcggaaccatcgac
gagttccgcgcctaccgcgagacccaccccggcgcggtctacctgcaccggggcgagacc
tacgtggtcaccgacctggacctcggagccaaggccgtccgctcggtgcgccagcgggtg
ggctattacaccaaggtgcgcggcagcaagagcaccgacatcctggaggtcctcggacag
aaggcgtgcttcggcacccgcgtctacttcgggcggctcagggtcaccgagcagatcacc
ggctacgaaaagcgcagcgtgcgcggcggcaagctgctcggcatcaccccactggacctc
ccgccgctggtcttcgagacagagggcgtctggttcgaggtggggcacgagatccgccgc
cgctgcgaggacgagttcctccacttcatgggcggcatccacgccttcgagcacgccgcc
atcggcatgctgcccctgctggtcatgaccgaccgcaacgacctgggcggcatctccacg
cccatgcacccgcaggtggatggaccggcggttttcatctatgatggcatgccgggcgga
gcagggctgacccgccaggcctttgacaaggccggagagctggtcgaaaccacgctgcgt
accataacgggctgcgagtgcgagctgggctgcccgtcctgcgtgcattcgcccaagtgc
gggtccggcaaccggcccatcgacaagcgcgccgcccagttcgtgctggaagcgatcctg
cacggcgaccccaaggccatcgaaccaaaggacatcgacgtgaatctccccggcatagat
ctgaaacggcccgctcccaaacgctacggcgtgctcgatatcgagacccgctactccgcc
gacgaggtgggcggctggaaccgcgccgaccgcatgggcgtgtccattgcctgcgtctac
gattcggaggacggcgccatgcacgactacgagcaggaccggatggacgacctggtgtcc
cacctgaaggactttgacctggtcatcggcttcaaccacgtgaaattcgactacgcggtc
ctgggtgggctccaccccttcaattttcgctccctgcccaatctcgacctgctggtggag
atcaacaaccggctgggctaccggctcaagctggacaacgtggcccaggccactctggac
atcggcaagtccgcggacggcctccaggccctcaagtggtggaaggagggccgcctggac
ctgatcaccgaatactgccggcaggatgtggccgtcacccgcgacgtctatctcttcggg
cgcgaaaacgggcacgtcttcttcaccaacaaggccgggcaaaaggtcaagctgcccgtg
gactggtag
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