Pseudodesulfovibrio cashew: GM415_05875
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Entry
GM415_05875 CDS
T06353
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel02020
Two-component system
psel02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GM415_05875
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GM415_05875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psel02035
]
GM415_05875
Bacterial motility proteins [BR:
psel02035
]
Flagellar system
Chemotaxis proteins
MCPs
GM415_05875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
CZB
HAMP
IFT57
PriC
Motif
Other DBs
NCBI-ProteinID:
QGY39664
UniProt:
A0A6I6JPU3
LinkDB
All DBs
Position
complement(1322701..1324719)
Genome browser
AA seq
672 aa
AA seq
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MNWKDCKLCLKFAMGFGIILLLLVSLGGWAVFGIEGIVGNAEEVIAGNELRGNFTQRVVD
HLKWSEKVNALLTDSNINKLEVQTDPHKCAFGKWYYSDARTKAEELVPAIKPLMASIEAY
HNKLHQSAVAIGEAYAPADVELGSFLRDKKLDHLKWMGRIKDALINPDAHSTDVMTDPHN
CALGKWLYSDKVTRWMQEDAEFGALVKHIFKPHMALHESAKDIDAMLDEGDRIGAQDFFR
NRTSSLAEATLGAIDGVIALNDRRQEGYDKAKDIYATVTVPALNSVQEILNKATATIADN
IMTDKEMLDEADRTLTGVMIFGVASVLLGIFLAWIIAKGIIGPLQKGIDFAKVVSSGDLR
AKVDISQKDEIGQLADSLSGMAAQLNHVVGEVNSATDSVSSGSEELSATAQALSQSVTEQ
AASIEQVSASMEQMSAGVRSNADNARETEAIASGAATGAKESGEAVSEAMDALKAIAERI
TIIQEIARQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSGKAAEEIGELSDTSM
GVADRAGSMLQDLVPQIGKTAELVKEIASSCLEQDKGVTEISAAIGQLDTIVQNNASASE
EMASTSEELSAQAQMLAQSMTFFTTDKQDAPRTRSVVVKSRDIPAQGLPRAQATPLSGGG
YRGTDDEDFEAF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaaagactgcaaactctgccttaaattcgccatgggattcggcatcatactg
ttgcttcttgtatcccttggcggatgggccgtgttcggcatcgaaggcatcgtcggaaac
gccgaagaggtcatcgccggaaacgagctacgagggaatttcacccaacgggtcgtggac
catttgaaatggtcggaaaaagtcaacgctctgttgacggactccaatatcaacaagctc
gaagtccagacagatccgcacaagtgcgccttcggcaagtggtactacagcgatgcccgc
accaaggctgaagagctggtgcccgccatcaagccgctcatggcctccatcgaggcctac
cacaacaagctccaccaatcagccgtagccatcggcgaagcctatgcgccggcggacgtc
gagctgggctcattcctgcgggacaagaagctcgaccacctcaagtggatgggccggatc
aaggatgccctcatcaaccccgatgcccactccaccgacgtaatgaccgacccgcataac
tgcgccctcggcaaatggctttactcagataaagtaaccaggtggatgcaggaggacgcg
gagttcggcgcgctggtcaagcatattttcaagcctcacatggccttgcacgaatcggcc
aaggatatcgacgcaatgctggacgagggagacaggatcggagcccaggatttcttccgc
aacaggacttcaagcctggccgaggccacgctcggggccatcgatggcgtcatcgccctc
aacgaccggcggcaggaagggtatgacaaggccaaagacatctacgccacggtcacggtg
cccgctctgaactcggtgcaggaaatcctcaacaaggcgacggccaccattgccgacaac
atcatgacggacaaggagatgctcgacgaagccgaccggaccctgaccggcgtcatgatt
ttcggcgtggcctcggtcctgctcggcatattcctcgcctggattattgccaagggcatc
atcggccctctgcaaaagggcatcgatttcgccaaggttgtttccagcggagacctccgc
gccaaggtggacatttcccagaaggacgagatcggccagttggccgattccctgtccggc
atggccgcccaactcaaccatgtggtgggcgaggtcaacagtgccaccgacagcgtctct
tcgggcagcgaggagttgtcggccacggcacaggccctatcccaatcggtgaccgagcag
gcagcgtccatcgagcaggtgtcggcctccatggaacagatgagcgccggagtccgctcc
aatgcggacaacgccagggaaacggaggccatcgcctccggagcggcaacaggggccaag
gaatcgggcgaagcggtcagcgaggccatggatgccctcaaggccattgccgaacggatc
accatcatccaggagatcgccagacagaccaatctgctggccctcaacgccgccatcgag
gccgcgcgggcgggcgaacacggcaagggattcgccgtggttgccgcggaagtgcgcaag
ctggcagagcgttccggcaaggctgcggaggagatcggcgagctctcggatacctccatg
ggagttgcggacagagccggaagcatgctacaggatttagtaccccagatcggcaaaacc
gccgaactggtgaaggaaattgcttccagttgtctggagcaggacaagggcgtcacggag
ataagtgccgcaatagggcagttagacaccattgtccaaaacaacgcatcggcttccgag
gagatggcttccacctccgaggaactctcggcccaggcccagatgctggctcagtccatg
acctttttcaccaccgacaaacaggatgcccctcgcacccgaagcgtcgtggtgaaaagt
cgtgacattccggcgcaagggctgccccgggcgcaagcaaccccgctttcgggcggaggg
taccggggaacggacgatgaggatttcgaagcgttttaa
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