Pseudodesulfovibrio cashew: GM415_06695
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Entry
GM415_06695 CDS
T06353
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel00550
Peptidoglycan biosynthesis
psel01100
Metabolic pathways
psel01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GM415_06695 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GM415_06695 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psel01011
]
GM415_06695 (mrdA)
Enzymes [BR:
psel01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GM415_06695 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psel01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GM415_06695 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QGY39821
UniProt:
A0A6I6JCL5
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All DBs
Position
1509907..1511817
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AA seq
636 aa
AA seq
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MSDLYNQAAQQPPRTGLFLLQALILGVFCLFSVRLWYLQIHQGEDFARRAIENQLRQESV
FSPRGLIRDRNGELLAVNEPAYALGLIREDCPDIDKTLHQVAAWTGADFESLKAVYAKKR
KRVKPFEPLTLVPDLSFGQVALIDANKLRWPGLEVQVRPRRRYLYGKLLAHVLGYVAEAN
EEELGKEPELALGDNVGKQGIEYMLEDRMRGVKGLVQYEVDVNGRRLQERVLKHPRAGHE
ISLSIDLGLQKVAMDWLAEEAGGVAVIDADTGQLWALATSPSYDSNDFTVGLSSKQWAAL
RDDPLHPMQNRVIQSVYPPGSVFKHVVAGAGLHYGAIDPYETVVCNGAVRLGKHIFRCWR
KGGHGKVDMEKALVQSCDVYFYKLGKKLSVDRMSEFAQACGFGEKTGILLPHEKGGNIPT
REWKRKRFGEAWQGGDNLNMAIGQGYTLVTPLQVARFFAGVLNGGKLLKPLLLKDEKTEV
QGKIPLTGSQLARLRNALIETVNDDHGTCRRIRTKGVAVGGKTGTAQVVRLTDELKALKD
DEIPYRFRDHGWMAAIAEKDGRRFAIAVLVEHGLHGGSGAGPVVKAVIDYLFQNEVHKNP
EARKAKARAAKLIKLPAKPKPKSKPKSKSAGGAHAN
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatctctataaccaggccgcccagcaacctcctcgcaccggacttttcctgctc
caggctctgatcctgggcgtgttctgcctcttctcggtccggctctggtatctccagatc
catcagggcgaagatttcgcccgccgcgccattgaaaaccagcttcgccaggagtcggtg
ttttctcccagaggactcattcgtgaccgtaacggcgagttgctggcagtaaacgagccc
gcctacgccctgggactcatccgtgaggactgtccggacatcgacaagaccctgcaccag
gtggccgcctggacaggcgcggacttcgaatcgctcaaggccgtgtacgcgaaaaagaga
aagcgggtgaaacccttcgagcctcttaccctggtgccggacctgtctttcggccaggtc
gccctcatcgatgccaacaagctgcgctggcccgggctggaggtccaggtcaggcctcgc
cgccgctacctttacggtaaactcctggcccacgtgctcgggtacgtggccgaggccaac
gaggaagagctgggcaaggagcccgagctggccctgggcgacaatgtgggcaagcagggt
atcgagtacatgctcgaggaccgcatgcgcggggtcaaagggctggtccagtacgaagtg
gacgtcaacggcagacggctgcaggagcgcgttctcaaacacccccgcgccggacacgaa
atttccctgtccatcgatctcggcctccagaaggtggccatggactggctggctgaagag
gcaggcggcgtggcggtcatcgacgccgataccggccagctctgggcgctggccacttcc
ccgtcctacgactccaacgattttacggtcgggctttcgtccaagcagtgggccgcgctg
cgcgacgatccgctccaccccatgcagaaccgcgtcattcagtccgtgtacccgccagga
tcggtcttcaagcatgtggtcgccggggcaggactccactacggggccatcgacccttat
gaaaccgtggtctgcaacggcgcggtacggctcggcaagcatatcttccgctgttggcgc
aagggcggccacggcaaggtcgacatggaaaaggccctggtccagtcctgtgacgtctat
ttctacaagctcggcaagaaactctccgtggaccgcatgtccgagttcgcccaggcctgc
ggtttcggcgagaaaaccggtatcctgctgccgcatgagaagggggggaacatccccacc
cgcgagtggaagcggaagcggttcggcgaggcctggcaggggggcgacaacctgaatatg
gccatcggccagggctacaccctggtcaccccgcttcaggtggcccgcttcttcgccggc
gtccttaacggcggcaagctgctcaagccgctgctgctcaaggacgagaagaccgaggtg
cagggaaagatcccgctgactggcagccagcttgcacggctcaggaatgccctgatcgag
acagtgaacgacgaccacggcacctgccgccgcatccgcaccaagggcgtggccgttggc
ggcaagaccggcacggcccaggtggtgcggctgaccgatgaactcaaggccctcaaggac
gacgagattccctaccgcttcagggatcacggatggatggctgccatcgcggaaaaggac
ggcagacgtttcgccatcgccgttctcgtggagcacggcttgcacggcgggtccggcgcg
ggtccggtagtcaaggcggtcatcgactacctgttccagaacgaggtccacaagaacccc
gaggcccgcaaggcaaaggcgcgcgccgccaagctgataaagcttcccgccaaacccaag
ccgaaatcaaagcccaaatccaaatccgcgggaggcgcgcatgccaattga
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