Pseudodesulfovibrio cashew: GM415_06835
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Entry
GM415_06835 CDS
T06353
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psel03016
]
GM415_06835
Enzymes [BR:
psel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GM415_06835
Transfer RNA biogenesis [BR:
psel03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GM415_06835
Prokaryotic type
GM415_06835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
MBL_MAP1B
Motif
Other DBs
NCBI-ProteinID:
QGY39849
UniProt:
A0A6I6JF97
LinkDB
All DBs
Position
complement(1540025..1540786)
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AA seq
253 aa
AA seq
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MRITFNGVGEAFDQDLPNTSLLIESGACSLLADCGFTAAAAFWRAAADPSGLDAVYLSHF
HGDHYFGLPQLLARFVDDGRTEPLTILGQSGVEQRVRELVNMAYTSLLDRAKFELRFLEC
RDGGTAELSGMRLSFALGDHPVPSLSLRVDSAGQSVFYSGDGRPTEATRALAKGCRMIVH
ESFSLDPDKPGHGTVDSSIDFAGEAGARILALVHVRRRVRHRLRDEILRRAAAAKGLEVL
LPEPGDHVTLTGS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccttcaacggcgtgggcgaggcctttgaccaggatctgcccaacaccagc
ctgctcatcgaatcgggagcctgctccctgctggcggactgcggcttcacggccgcggcg
gcattctggcgggcggctgcggacccttccgggctggacgcggtctacctctcccacttt
cacggcgaccattacttcggcctgccgcagctcctggcccgcttcgtggacgacggcagg
accgagccattgaccatcctcggtcaatctggcgtggagcaacgcgtcagggaactcgtg
aacatggcttacacctcgctcctggaccgggcgaaattcgaactgcgctttctggaatgc
cgcgacggggggactgcggaactctccggaatgcgcttgtcctttgcccttggcgaccat
cccgtgccgagcctgtccctgcgagtggacagcgctggccaatcggtcttctactccggg
gacggaaggccaaccgaggctacccgagccctggccaaggggtgtaggatgatcgtgcat
gagtccttttccctggatccggacaagcccggccacggcaccgtggactcctccatcgac
tttgcaggggaggccggagcccgaatcctggccctggttcacgtacgccgacgcgtgcgc
caccggctgcgggacgaaatcctgcgccgcgctgccgccgcgaaaggcctggaagtgctc
ctccccgagcccggagaccacgtcaccctgaccggttcgtga
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