Pseudodesulfovibrio cashew: GM415_06885
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Entry
GM415_06885 CDS
T06353
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
GM415_06885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
psel03011
]
GM415_06885
Ribosome [BR:
psel03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
GM415_06885
Bacteria
GM415_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
PCB_OB
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QGY39859
UniProt:
A0A6I6JFA7
LinkDB
All DBs
Position
1548193..1549962
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AA seq
589 aa
AA seq
DB search
MEKTTESVEMPEMEMNFADALDEYLNSDFGDLDEGTIVSGEVVKVDKDYVLVDVNFKSEG
QIPVSEFTEADGSIAVSVGEKVDVYVARKNEAEGTIYLSRDKAKRMQLFDKLEEVQEKDG
EVIGRIIRRIKGGYTVDLGGVEAFLPGSHVDLRPVPDMDALVNQEFDFKILKINRRRSNV
IVSRRVLLEEMRSEQRDKLLSTLEDGQVVTGKVKNITEYGVFIDLGGLDGLLHITDMSWK
RIKHPKEMVNLGDDLELKILSFDRDAQKVSLGLKQLVPDPWENIAEKYPQGSRFTGTITN
LADYGAFVELENGVEGLVHISEMSWTRKLRHPSQMVKVGEEVEVIVLGVDPDKKRISLGM
KQISPNPWDVVAEKYPEGTVLEGAIKNITEFGVFIGIEEGIDGLIHVSDISWTKKIRHPS
EVYKVGDPVQAKVLTVDKENEKFTLGVKQLTEDPWTQVPAKYPVGQMITGTVTNITDFGL
FVEVEEGIEGLVHVSEISRKKIKSPSEMFKEGDSIEAKVIHVSADERRLGLSIKQTKEEP
AGGRKSKSFGSTTSGDIAGSTLGDLLREKLEEAAGEIPVDEPEAPAEEE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaactactgaatctgttgaaatgccggaaatggaaatgaattttgcagatgct
ctcgacgagtatctgaattctgatttcggcgacctggacgaaggcaccatcgtctccggt
gaagtcgtcaaggtggacaaggactatgtcctcgtcgacgtgaatttcaaatccgaaggc
cagatccccgtgtccgagttcaccgaggccgacggctccatcgccgtctccgtcggtgag
aaggtcgacgtctacgtggcccgcaagaacgaggccgagggcaccatttacctgtcccgg
gacaaggccaagcggatgcagctcttcgacaagctcgaagaagtgcaggagaaggacggc
gaagtcatcggccgcatcattcgtcgcatcaagggcggctacaccgtcgatctgggcggc
gtggaagccttcctgcccggctctcacgttgacctgcgtcccgtcccggacatggacgct
ctggtcaaccaggagttcgacttcaagatcctgaagatcaaccgccgccgctccaacgtc
atcgtttcccgccgcgtcctcctcgaggagatgcgcagcgaacagcgcgacaagctgctc
agcactctggaagacggccaggtcgtcaccggtaaggtcaagaacatcaccgaatacggc
gtgttcatcgacctcggcggcctcgacggtctcctccacatcaccgatatgtcctggaag
cgcatcaagcatcccaaggaaatggtcaacctgggcgacgatctcgaactgaagatcctc
tcctttgaccgcgatgcgcagaaggtctccctgggcctgaagcagctcgttcccgatccg
tgggagaacatcgccgagaagtacccccagggttcccgcttcaccggcaccatcaccaac
ctggccgactacggcgcgttcgtcgagctggagaacggcgtggagggactggtccacatc
tccgagatgtcctggacccgcaagctccgccacccctcccagatggtcaaggtcggtgaa
gaggtcgaggtcatcgtcctcggcgtcgatcccgacaagaagcgcatctccctcggcatg
aagcagatctccccgaacccgtgggatgtcgtggccgagaagtaccccgagggcaccgtc
ctcgagggcgccatcaagaacatcaccgagttcggcgtgttcatcggcatcgaggaaggc
atcgacggcctgattcacgtgtccgacatctcctggaccaagaagatccgccacccctcc
gaggtttacaaggtcggcgatccggtccaggccaaggtcctgaccgtggacaaggagaac
gagaagttcaccctgggcgtgaagcagctcaccgaggacccgtggactcaggtcccggcc
aagtaccccgtgggccagatgatcaccggtaccgtgaccaacatcaccgacttcggtctc
ttcgtcgaggtcgaggaaggcatcgagggtctggttcacgtctccgagatcagccgcaag
aagatcaagtccccctccgagatgttcaaggaaggcgactccatcgaagccaaggtcatc
cacgtgtccgctgacgagcgccgtctcggcctctccatcaagcagaccaaggaagagccc
gctggcggacgcaagtccaagtccttcggctccaccacctccggcgacatcgccggttcc
accttgggcgacctgcttcgcgagaagctcgaggaagccgctggtgaaatccccgtggac
gagcctgaggctcccgccgaggaagaatag
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