Pseudodesulfovibrio cashew: GM415_07430
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Entry
GM415_07430 CDS
T06353
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psel03009
]
GM415_07430 (rimO)
Enzymes [BR:
psel01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GM415_07430 (rimO)
Ribosome biogenesis [BR:
psel03009
]
Prokaryotic type
ribosomal protein modification factors
GM415_07430 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QGY39962
UniProt:
A0A6I6JI40
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All DBs
Position
1658160..1659485
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AA seq
441 aa
AA seq
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MPHSSDPVRVYTVSLGCPKNRVDTERLLGTLGEAMVPAETVDGADLALINTCGFIQPAVE
ESVAAILDAVREADEAAEGHGIRPLVAVAGCLVSRYAEDLKSELPEVDLWLNTEEIGLWP
GMVKAALGVGVEEDTPRRLSTGPGHAYLKISEGCSHDCRFCTIPSIRGPHVSWPVDVLLK
EAAELARAVPEIVVVGQDSTAYGSDLGGDNDLVHLVGGLAKIPDLQWLRLMYLYPAGLTE
SLLGFLRDVGAPFLPYFDIPLQHAHPDVLGAMGRPFARNPEKVIDRVRRFFPEAALRTTI
IVGYPGETDAHFEHLMRFVEKTRFHHLGVFPYWPEEGTPAAVMDNQVPDHVKEERRDALM
ALQADISREIMESYVGEILPVLIERPSPEWPGLYEGRAWFQAPEVDGVTYVSAPPETGLT
PGTIIEVEIEGADTYDLSGLA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcctcattcttccgatcccgtccgcgtctacaccgtcagcctcggttgccccaaaaac
cgggtggataccgagcggttgctcggaaccctgggtgaggccatggtcccggccgagacc
gttgacggggccgacctggccctgatcaacacctgcggtttcatccagcccgccgtggag
gaatcggtcgccgccatcctggacgccgtgcgcgaggctgacgaggccgccgaaggccat
ggaatccgtcccctggtggccgtggccgggtgcctggtctcgcgctacgccgaggacctc
aagagcgaactgcccgaggtggacctctggctcaataccgaggagatcggcctgtggccc
ggtatggtcaaggccgctctgggcgtcggcgtggaagaggacaccccccgccgtctctcc
accggtccgggacacgcctatctgaaaatttccgagggatgctcccacgactgccgcttc
tgcaccatcccctccatccgggggccgcacgtgagctggcccgtggacgtgctgctcaag
gaggccgccgagctcgcccgggccgtgcccgagatcgtggtcgtgggccaggactccacg
gcctacggctccgacctgggcggggacaacgatctggtccatctggtcggcggactggcg
aaaatcccggatctgcaatggctgcggctcatgtatctctatcccgccgggctgaccgag
tccctgctcgggttcctgcgcgacgtgggcgcgccgttcctgccctatttcgacatcccg
ctccagcacgcccaccccgatgtgctcggggccatgggccgcccctttgcccgcaacccg
gaaaaggtcatcgaccgcgtccgtcgtttcttcccggaggcggccctgcgcaccaccatc
atcgttggctaccccggcgagaccgacgcccacttcgagcacctgatgcgcttcgtggaa
aaaacccgcttccatcacctcggcgtgttcccgtattggccggaagagggcacgcccgcc
gcggtcatggacaaccaggtgccggaccacgtgaaggaggaacgccgggacgcgctcatg
gccctgcaggccgacatcagccgcgagatcatggaaagctacgtgggcgagatcctgccc
gtgctcatcgaacgcccctcgcccgaatggcccggactctacgaaggccgcgcctggttc
caggccccggaggtggacggcgtcacctacgtcagcgcgccgcccgagaccggattgacg
cccggcaccatcattgaagtggagatcgaaggcgcggacacctacgacttgtcagggctg
gcttag
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