Pseudodesulfovibrio cashew: GM415_07625
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Entry
GM415_07625 CDS
T06353
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psel02000
]
GM415_07625
Transporters [BR:
psel02000
]
Other transporters
Pores ion channels [TC:
1
]
GM415_07625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
VWA_2
Cytomega_UL20A
Motif
Other DBs
NCBI-ProteinID:
QGY39998
UniProt:
A0A6I6JG48
LinkDB
All DBs
Position
complement(1700289..1701341)
Genome browser
AA seq
350 aa
AA seq
DB search
MEQSRKLLLLTLLAVLTLTFSLAAPASAKMIKKADNFILFLDQSGSMAMHHKSLGKKKID
LAVETLQSMNKAIPDLDYTSGMFLFAPFEAKVQPGAYNKAAMASGIDSVGTEFAIFNRRT
TLGNGLMDLDPVIAGLSGKTALIIFTDGNSNLGADPIAQAQALYSKYGDKLCIHVVSYAD
TPRGQMIIDEIRALSSCTVPADYASLMAAGAMDQYAKDVFYEEVADAPAPAPAPVVPMAK
ETITFSLHFGFDKYAITDEMIPVLEEAKAILDEDAKATFEVAGHTDSTGPEAYNQGLSER
RANSVKTWLVKNGISADRLNAKGYGELSPKYDNATKEGRKLNRRVEILTK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatccagaaaactgcttttgttgactctgttggctgtcctgaccttgacgttc
tccctggccgccccggcctccgcgaaaatgatcaaaaaggcggacaatttcatcctcttc
ctcgaccagtccggttccatggccatgcaccataagagccttggcaaaaagaaaatcgac
ctggccgtcgaaacccttcaatccatgaacaaggccattcccgacctggactacacctcg
ggcatgttcctgttcgccccctttgaggcaaaggttcagcccggcgcctacaacaaggcc
gccatggcctccggcatcgactccgtcggcaccgaattcgccatcttcaaccgccgcacc
accctgggtaacggcctgatggacctcgacccggtcatcgccggcctctccggcaagacc
gcgctgatcatcttcaccgacggtaattccaacctcggcgccgatcccatcgcccaggcc
caggccctgtactccaagtacggcgacaagctctgcattcacgtggtcagctacgcggac
accccgcgcggccagatgatcatcgacgaaatccgcgccctgtcctcctgcaccgtgccc
gccgactacgcctccctgatggccgccggcgccatggatcagtacgccaaggacgtgttc
tacgaagaagtggcggacgccccggctccggctccggccccggtcgttcccatggccaag
gaaaccatcaccttcagcctgcacttcggctttgacaagtacgccatcaccgatgagatg
atccccgtgctcgaggaagccaaggccattctggacgaagacgccaaggccaccttcgag
gtcgccggtcacaccgactccaccggtcccgaggcctacaaccagggcctgtccgaacgc
cgcgccaactccgtcaagacctggctcgtcaagaacggcatctccgccgatcgcttgaat
gccaagggttacggcgagttgagccccaagtacgacaacgccaccaaggaaggccgcaag
ctgaaccgcagggttgaaatcctgaccaagtag
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