Pseudodesulfovibrio cashew: GM415_08240
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Entry
GM415_08240 CDS
T06353
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel00470
D-Amino acid metabolism
psel00550
Peptidoglycan biosynthesis
psel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GM415_08240 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GM415_08240 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psel01011
]
GM415_08240 (murD)
Enzymes [BR:
psel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GM415_08240 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psel01011
]
Precursor biosynthesis
Amino acid ligase
GM415_08240 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
2-Hacid_dh_C
Pyr_redox
YjeF_N
TrkA_N
FAD_binding_3
NAD_binding_8
NAD_binding_2
NAD_binding_7
F420_oxidored
Pyr_redox_2
HI0933_like
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
QGY40115
UniProt:
A0A6I6JBH4
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All DBs
Position
complement(1833004..1834305)
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AA seq
433 aa
AA seq
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MNRIVKNFINEAILTGKRGVVVGVGKSGLAAARLLDVLGAKVRVVDRNESLTEDALGALK
GEAELVTGPHDKAHFADADIIVLSPGVPVKRMADALDGIPARKIVSELEFASWFIEAPVL
AITGTNGKTTTTTLISEIFEHAGKRAFTGGNIGTPLCEYLLDMEPAEVIVLEVSSFQLQN
CRLFKPRVGVFLNFAANHLDYHESMEEYLDAKLNLFAQMTGEDTALLHESLRETIGDRGF
TNAHVEWFGPTDRFEAPNLPGEHNRSNVEAAWQAVSRFGVTEAQAAEAIRNFKPLAHRIE
TVAEVGGVLYVDDSKATTLDAVRAAVRSFDRPVRLLMGGVWKGGDVAAFAADVRDAVIHV
GLFGASRDILEGPLSEVFPVTWDETLEAAVRRQAAEAREGEVVLLSPATSSFDQYRNYGE
RGDDFKRVAEALA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccgcatcgtcaagaatttcatcaacgaggccatcctgaccggcaagcggggcgtg
gtcgtgggcgtgggcaagtccggcctggccgcggcccggctcctggacgtgctcggggcc
aaggtgcgcgtggtggaccgcaacgaatccctgaccgaggacgccctgggcgcgctcaag
ggcgaggccgagctggtcaccggaccgcacgacaaggcgcacttcgcggacgcggacatc
atcgtcctctccccgggcgtgcccgtgaagcgcatggccgacgcccttgacggcatcccg
gcgcgcaagatcgtctcggagctggagttcgcctcctggttcatcgaggccccggtgctg
gccataaccggaaccaacggcaagaccacgaccaccaccctgatcagcgaaattttcgag
cacgcgggcaaacgcgccttcaccggcggcaacatcggcacgcccctgtgcgaatacctg
ctggacatggagcccgccgaggtcatcgtgctcgaggtctccagcttccagctccagaac
tgccgcctgttcaagccccgggtgggcgtcttcctcaacttcgcggccaaccacctggac
taccacgagtccatggaggaatacctggacgccaagctgaacctcttcgcccagatgacc
ggcgaggacaccgccctgctccacgagtccctgcgcgagaccatcggcgaccggggcttc
accaacgcccacgtggagtggttcggtcccacggaccggttcgaagccccgaacctgccg
ggcgagcacaaccgatccaacgtggaggccgcgtggcaggccgtcagcaggttcggcgtg
accgaagcccaggctgccgaagccatccggaatttcaagcccctggcccaccgcatcgag
accgtggccgaggtaggcggcgtgctctacgtggacgactccaaggccaccaccctggac
gcggtccgggcggcggtccgctccttcgaccgcccggtgcgcctgctcatgggcggcgtg
tggaaaggcggcgacgtggccgcctttgccgcggacgtcagggacgcggtcatccatgtg
ggcctcttcggcgccagccgcgacatcctggaaggccccctgtccgaggtcttccccgtg
acctgggacgagaccctggaggccgccgtgagaaggcaggccgccgaggcgcgggaaggc
gaggtcgtcctgctctccccggccacgtccagcttcgaccagtacaggaactacggcgag
cgtggcgacgacttcaaacgcgtggcggaggcattggcatga
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