Pseudodesulfovibrio cashew: GM415_10695
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Entry
GM415_10695 CDS
T06353
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GM415_10695 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psel03400
]
GM415_10695 (ruvB)
Enzymes [BR:
psel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GM415_10695 (ruvB)
DNA repair and recombination proteins [BR:
psel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GM415_10695 (ruvB)
RecFOR pathway proteins
GM415_10695 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_14
Mg_chelatase
AAA_22
DUF815
AAA_16
Sigma54_activat
AAA_17
TsaE
RNA_helicase
TIP49
nSTAND3
AAA_33
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QGY40572
UniProt:
A0A6I6JJT9
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All DBs
Position
2395195..2396184
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AA seq
329 aa
AA seq
DB search
MSKCTLPEENVRPRKLSDFIGQDDLRANLDVFIRAATERERPLDHTLFYGNPGLGKTTLA
RIMASELGVNMVSTSGPVLERSGDLAAILTNLERGDILFIDEIHRMPATVEEVLYPAMED
FQIDLVIGSGPGARTVKLDLEPFTLVGATTRLGLLTSPLRDRFGCIFRIEFYTPEELGRI
VERSASIIGVEVAPEGALAIGSRARGTPRIANRLLRRVRDYALVHGDGRVTRELAESSLE
RLDVDQYGLDNMDRKILSLMVEHFNGGPVGLKTIAAACAEEVRTIEDIYEPYLIQCGFLK
RTPRGRVATAKAYQHLKLRMEDEDQHRLI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatgcaccctcccggaagagaatgtccggccccggaaactgagtgatttcatc
ggccaggacgacctgcgcgccaacctggacgttttcatccgggccgccaccgagcgggag
cgtcccctggaccacaccctgttctatggcaaccccggcctgggcaagacgaccctggcc
cggatcatggcctcggagctgggcgtgaacatggtctccacctccgggccggtgctggaa
cgttccggcgacctggccgccatcctgaccaacctggagcgcggcgacatcctgttcatc
gacgagattcaccgcatgcccgccactgtggaggaggtcctgtacccggccatggaggat
ttccagatcgacctggttatcgggtccggtccgggcgcgcgcacggtcaagcttgacctg
gagccattcaccctggtgggggctaccaccaggctcgggctgttgacctcgccgttgcga
gatcgcttcggctgcatcttccgcatcgaattttacacgcccgaggaactgggccgcatt
gtggagcgctcggcgtccatcatcggcgttgaagtggcccctgagggcgcgcttgccatc
ggcagccgggcgcgcggtactccgcgcatcgccaaccggctgttgcgccgcgtgcgcgac
tacgccctggtgcacggcgacggaagggtcacgcgcgagctggccgagtcctccctggag
cgtctggatgtggatcagtacggcctggacaacatggaccgcaagatcctttcgctcatg
gtcgagcacttcaatggcggtcccgtcggcctgaagaccatcgccgcggcctgtgccgag
gaggtgcggaccatcgaggatatctacgagccctatctcatccagtgcggcttcctcaag
cgcaccccgcgtggcagggtggccacggccaaggcctatcagcacctcaagctgcgcatg
gaagacgaagaccagcaccggctgatctga
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