Pseudodesulfovibrio cashew: GM415_11050
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Entry
GM415_11050 CDS
T06353
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel03030
DNA replication
psel03430
Mismatch repair
psel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM415_11050
03430 Mismatch repair
GM415_11050
03440 Homologous recombination
GM415_11050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psel03032
]
GM415_11050
03400 DNA repair and recombination proteins [BR:
psel03400
]
GM415_11050
Enzymes [BR:
psel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GM415_11050
DNA replication proteins [BR:
psel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GM415_11050
DNA repair and recombination proteins [BR:
psel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GM415_11050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
QGY40637
UniProt:
A0A6I6JKI3
LinkDB
All DBs
Position
2470386..2471225
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AA seq
279 aa
AA seq
DB search
MTRHDDPLAALVGQEHAVTRLNNIAHHPPQSIVIEGGDADSRVALALYWAMRLNCASGDI
PCGQCPACRQIADFAFNDLLFFDGREGLIKVDAVRGQRGTWGQPPNGDGYRVTIFAEAQM
FMTEAANALLKSLEEPRPGNVFVLAAPQRERLLETLVSRSWVVTLAWPDIRENSPEVTEW
TTALVRFWATGQGWFERTSAKGAVDKNLAMRVVLGMQRELREALSGACGTPLSGRMAQAY
DLRGLQKIGLVLDQALDALNTQVPVNPAMVLDWVATRMV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacgagacacgatgatcccctggccgctctggtcgggcaggagcatgcggtcacgcgt
ctgaataatatcgcccaccatcctccccaatccattgttatcgaagggggcgatgcggac
agccgcgtcgccctcgccctgtattgggccatgcgcctgaactgcgcttccggcgacatc
ccgtgcggccaatgcccggcgtgtcgccagatcgcggatttcgccttcaacgacctgctt
tttttcgacggccgggaagggttgatcaaggtcgacgccgtgcgcggtcagcgcggcacc
tgggggcagccgcccaacggcgacggctaccgggtgaccatctttgccgaggcccagatg
ttcatgaccgaggccgccaacgcgctgcttaaatcccttgaggagccgcgccccggcaac
gtctttgtcctggctgcgccccagcgcgaaaggctgttggagactctggtctcgcggtcc
tgggttgtcaccctggcctggcccgatattcgcgaaaactcgccggaggtcacggagtgg
accacggctcttgtccggttctgggccacggggcaggggtggttcgagcgtacctcggcc
aagggggccgtggacaagaatctggccatgcgcgtggtgctgggcatgcagcgcgaattg
cgcgaggcgttgtccggcgcttgcggtacgccgctctccggcagaatggcccaggcctat
gacctccgtgggttgcagaagatcggcctggtgctggatcaggccctggacgcgctcaac
acccaggttccggtcaacccggccatggttctggactgggtcgccacaaggatggtttga
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