Pseudodesulfovibrio cashew: GM415_11180
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Entry
GM415_11180 CDS
T06353
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psel01011
]
GM415_11180
Enzymes [BR:
psel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GM415_11180
Peptidoglycan biosynthesis and degradation proteins [BR:
psel01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GM415_11180
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QGY40661
UniProt:
A0A6I6JET0
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Position
2498967..2499710
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AA seq
247 aa
AA seq
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MRRILALFAVSVLLAMTGCASHVPSSPPSGGKISAPRTYDPKTKPYTVLGRTYYPLQSAA
GYDEVGLASWYGSDFHGNKTADGRTYNMYGISAAHKTLPLGTRVRVTNLENDRSVELTIN
DRGPFVRGRILDLSYGAAKRLGTVERGVAKVRITALGAAPGAKRVQVVKSAIKYYHVRVG
AFAVRDNAERTHRRLVAAGYTGAVINTVNRDGQILHIVQAGSFVSRDKAEAVQLRLKSQF
PTCYIVS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcatcctggctttgttcgctgtttcggtcctgctggccatgaccgggtgcgcc
tcccacgtcccttcctccccgccatcgggcgggaagatctctgctccccggacctatgat
cccaagaccaagccgtacaccgtcctcggcaggacgtattatccgctccagagcgcggca
ggatacgacgaggtaggcctggcctcctggtatgggtcggattttcacggcaacaagacg
gcagacggtcggacatacaacatgtacggcatttccgcagcccacaagaccctgcctctc
gggacgcgcgtcagggtgaccaaccttgagaacgaccgttcggtagagctgaccataaat
gacaggggcccgttcgtccgaggccgtattctggatctgtcctatggcgcggccaagcgg
ctgggcacggtggagcggggcgtggccaaggtcaggattaccgctctcggcgcggcaccg
ggcgcgaaacgggtgcaggtggtcaagagtgccatcaaatactaccatgtccgggtgggg
gcgtttgccgttcgggacaacgccgaacgcacacaccgcaggctggtggcagcgggctac
acgggcgcggtcatcaacaccgtgaatcgcgacggccagattcttcatatcgtacaggcg
ggcagcttcgtcagccgcgacaaggccgaggcggtccagctccggttgaagtcgcagttc
ccgacctgctacatcgtcagctag
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