Pseudodesulfovibrio cashew: GM415_11955
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Entry
GM415_11955 CDS
T06353
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psel02000
]
GM415_11955
Transporters [BR:
psel02000
]
Other transporters
Pores ion channels [TC:
1
]
GM415_11955
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Ortholog
Paralog
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GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
QGY40807
UniProt:
A0A6I6JKZ9
LinkDB
All DBs
Position
complement(2644259..2645446)
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AA seq
395 aa
AA seq
DB search
MKKAILFALLMAMTACANVDLSLTDQIKVYSESPVRKSSLQVSVHPKGKQYRPLTAYFPP
FIIQQDNSDFNTLGTEFARTFHDVWTQERLFPTQEFSSTPDYPGLSASLQKARLRGADLL
ILGSVPYFYAGSNVDDTAITIRIDIYAAGNGMLLWTMLQSGRIEFRQPDDYVYFVHEFRM
PDGPFNKLIRSIAMDMAIPLKGWLPDPEEQYPFVENTGEMKAGLTKPSSAPSASGQAGQP
EGGQPLSGGDGAGMERNLPAEQTGGQAEKQGDPGITPRPDINGVNLDIHFDFDKATIAKQ
SHPRLDALGEALNSPELKGKRIIIAGHTDASGTETYNLTLSKQRADAVKRYLVEKWSISP
DQIETVGYGKSRPIASGISPEAMQKNRRVEIRLAQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcaatacttttcgcactgttgatggcaatgacagcctgcgccaacgtggac
ctctccctgaccgaccagataaaggtctattccgaatcccccgtcaggaagtcgtcactc
caggtctcggtgcaccccaagggcaagcagtaccgccctctgacagcctatttcccgcct
ttcatcatccagcaggacaacagcgacttcaacaccctcggcacggagttcgcccgcacc
ttccacgacgtctggacccaggagcgcctctttcccacgcaggaattcagttctaccccc
gattacccggggctgagcgcatccctgcagaaggccaggttacgcggcgcagacctgctc
atcctcggctcggtgccctacttctatgccgggagcaatgttgacgacacggccatcacc
atccgtatcgacatctatgcggcaggcaacggcatgctcctgtggaccatgctccagtcc
gggcgcatcgaattcaggcaacccgacgattacgtctatttcgtccacgaattccgcatg
ccggacggcccgttcaacaagctgatccggtccattgccatggacatggccattccgctc
aagggatggctgcccgatccggaagagcagtacccgttcgtcgaaaacaccggtgaaatg
aaggccggactgaccaaaccctcttccgcaccttccgcctcaggtcaggcgggacagccc
gaaggcggccagccgctctcaggtggcgatggagcaggaatggaacgaaaccttcccgca
gagcagacaggaggacaggccgaaaaacagggtgacccgggaattacaccccgccccgac
atcaacggagtgaacctggacatccacttcgatttcgacaaagcgaccatagccaagcag
tcccatccccgcctggacgctcttggcgaggccctgaactctccggagctcaagggcaaa
cggataatcatcgcgggccacaccgacgcaagcggaaccgagacctacaatctgacgctc
tccaagcagcgcgccgacgcggtcaaacgctatctggttgaaaagtggtccatctccccg
gaccagatagaaactgtgggctacggcaaatccagacccatagcctcggggatctccccc
gaagccatgcagaaaaaccgcagggttgaaatacgcctggcgcaataa
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