Pseudodesulfovibrio cashew: GM415_12960
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Entry
GM415_12960 CDS
T06353
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psel03009
]
GM415_12960
Ribosome biogenesis [BR:
psel03009
]
Prokaryotic type
ribosomal protein modification factors
GM415_12960
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Ortholog
Paralog
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GFIT
Motif
Pfam:
YcaO
TPR_1
TPR_2
TPR_16
TPR_11
TPR_8
TPR_12
TPR_9
Coatomer_E
TPR_7
TPR_19
ANAPC3
TPR_14
TPR_CcmH_CycH
Motif
Other DBs
NCBI-ProteinID:
QGY40997
UniProt:
A0A6I6JLH0
LinkDB
All DBs
Position
2859719..2861449
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AA seq
576 aa
AA seq
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MIELKDCVKTYTTDQDKACSPVETVTRVKGLLAEKCAGVLDKTDRVDTGRLGIPVFVSTC
GPEAKRFMPTRKQMGKGASPEQAEASALMELVERFSYFTFWADEDNFTRLTWSEAQKKWP
GEVMDIAMIARSVEEDISSEDAARLMDLHRWRFHPALNVATGKHEYVPLDWFKKLNEFNG
SSAGNTFEESIGQGGCELVERHVCALIDRSRKVMPTIDPASYSDPVLSRLAGCFEANGVK
LVLKDFSLGQPVPTVAAVAWDPKTFPGLSEIVFTAGTSSSPVKAAIRAVTEVAQLAGDFE
TSRVYEASGLSKFTSLDDIQWLLEGEMVPLDSLPTVEEPNIYNELMAMAEGLEKQGTPLY
SVDTRHPDLMVTTNYNFVPGFDFRERTPHRSIGLFVGRILAEDAEFGDAMEGLEVVEEIY
PDAYFLPFFRGLLAMRMQDVEYAVEQFREAEPMQPADAERALAAFYQGYALSQLEEWEDA
VAPLGRAIELDAETKEYFNLRGVAHFKGGRYEEAAGDFRAALDIDSGSPHDLANLGLCHK
FMGNDAEALDYLGAALKLDPELEYARNHYDELVQSS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgagctcaaggattgcgttaagacatacaccaccgatcaggacaaggcgtgcagc
cccgtggaaacggtcacgcgcgtcaagggattgctcgccgagaagtgtgcgggcgtcctg
gacaagaccgatcgggtggataccggcaggctgggtattcctgtattcgtgtccacctgc
ggccccgaggccaagcggttcatgcccacccgcaagcagatgggcaagggcgcttcgccg
gaacaggccgaggcttcggccctcatggagctggtggagcggttttcctatttcaccttc
tgggccgacgaggataactttactcgtttgacctggagcgaggcgcagaaaaagtggccg
ggggaagtcatggacatcgccatgatcgcccgttcggtggaagaggatatctcttccgaa
gacgcggcccggctcatggacctgcatcgctggcgctttcatcccgccttgaacgtggcc
acgggcaagcatgagtatgtgcccctggactggttcaagaagcttaacgagtttaacggg
tcctcggcgggtaatacctttgaggagtccatcggacagggcggatgcgagctggtggag
cgccacgtctgcgcccttatcgaccgtagccgcaaggtcatgccgaccattgaccccgca
tcctactccgatccggtcctgagccggctggcaggctgcttcgaggccaacggcgtcaag
ctggtgctcaaggacttttccttgggacagcctgtgccgacagtggcggccgtggcctgg
gatcccaagacctttccgggcctaagcgagatcgtttttacggcgggaacatcttcgtca
ccggtaaaggcggccatccgcgccgtaacagaggtggcacagctggccggagacttcgag
accagtcgcgtgtacgaggcctccgggctttccaagttcacctctctggacgacattcag
tggttgctggaaggcgagatggttccgttggattccctgcccactgtggaggaacccaat
atatataatgaattgatggctatggccgaggggttggaaaaacaggggacgccgctgtat
tcggtggacacccgtcatccggatctcatggtcaccaccaattacaatttcgtccccggt
ttcgattttcgggagcggacgcctcaccggtccatcgggctttttgtgggccgtatcctg
gccgaggacgccgaattcggcgacgccatggaagggctggaggtcgtcgaggagatttat
ccggacgcgtattttttgccgtttttccgtggcctgctcgccatgcgcatgcaggacgtg
gagtacgcggtggaacagttccgcgaggcggagcccatgcagcccgcggatgcggaacgg
gctttggctgccttctaccaagggtatgcactgtcccaactggaagagtgggaggacgcc
gtggcgccgctcgggcgggctattgaacttgacgccgagaccaaggaatacttcaacctg
cgtggcgtggcgcacttcaagggcgggcgctacgaagaggctgccggggatttccgggcc
gcgttggacatcgactccggttcacctcatgatttggccaatctcggtctatgtcacaag
ttcatgggtaacgatgccgaggccctggattacctgggcgcggccctcaagcttgatccg
gaactggagtacgccaggaatcattacgatgaactcgtgcaatcctcatag
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