Pseudodesulfovibrio cashew: GM415_13020
Help
Entry
GM415_13020 CDS
T06353
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel02020
Two-component system
psel02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GM415_13020
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GM415_13020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psel03021
]
GM415_13020
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psel02035
]
GM415_13020
Transcription machinery [BR:
psel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GM415_13020
Bacterial motility proteins [BR:
psel02035
]
Flagellar system
Flagellar assembly proteins
Stator
GM415_13020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
Sigma70_r3
DnaD_N
UPF0122
PhyR_sigma-like
HTH_15
Motif
Other DBs
NCBI-ProteinID:
QGY41008
UniProt:
A0A6I6JJ80
LinkDB
All DBs
Position
complement(2869382..2870167)
Genome browser
AA seq
261 aa
AA seq
DB search
MAILNSSGRSSSSKNDPWRELEAGAKSWDDFSPRDREDIVRFYAPKIRILALRLKAKLPH
SVELNELISAGSLGLLDALGKFNPGLGIKFETYSENRIKGAMLDELRRMDWFSRGLRQKV
KVLEDAQRHIEHETGAPATPEQLQEHTGMSEKEVQQGLEALHNQMCLSLDSFHENVIGRK
NMTEDEPFQSTAFQEIVDKVANLIEELTPREKLVISLYYGEELNMKETAEVMDITEGRVS
QLHSQALIKLRKTFRARYESE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattaaattcttctggaagaagctcctcttccaagaacgatccgtggcgtgag
ctggaagcaggcgccaaaagctgggacgatttctctccacgggaccgtgaggacatcgtc
cgcttctacgcgcctaaaatccgcatcctcgccctgcgcctcaaggccaagctgccccat
tcggtcgaactcaacgagttgatcagcgcgggcagcctgggcctgcttgatgccctgggg
aagttcaatcccggcctcggcatcaagttcgagacatactccgagaaccggatcaagggg
gccatgctcgatgaactcagacgcatggactggttctcacgtggactcagacagaaagta
aaggttctggaagacgcccagcgtcatatcgaacatgagactggtgcccccgcgacccct
gagcaacttcaggaacacaccggaatgtctgagaaagaggtccaacagggactggaggcg
ctgcacaaccagatgtgcctcagcctggacagcttccatgaaaacgtcatcggccgaaaa
aatatgaccgaagacgagcctttccagtccaccgcatttcaggaaatagttgacaaagta
gccaatctcattgaggaattgacgccaagagaaaaattggtcatatctctatactacggg
gaggagttgaacatgaaggaaacagccgaggtcatggacattaccgaaggccgtgtttcc
cagcttcactcccaggccctgataaaactgagaaaaacattcagagctcgctacgaaagc
gagtaa
DBGET
integrated database retrieval system
