Pseudodesulfovibrio cashew: GM415_13505
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Entry
GM415_13505 CDS
T06353
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel03030
DNA replication
psel03430
Mismatch repair
psel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM415_13505 (dnaX)
03430 Mismatch repair
GM415_13505 (dnaX)
03440 Homologous recombination
GM415_13505 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psel03032
]
GM415_13505 (dnaX)
03400 DNA repair and recombination proteins [BR:
psel03400
]
GM415_13505 (dnaX)
Enzymes [BR:
psel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GM415_13505 (dnaX)
DNA replication proteins [BR:
psel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GM415_13505 (dnaX)
DNA repair and recombination proteins [BR:
psel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GM415_13505 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_30
AAA_18
AAA_19
TsaE
TIP49
DEAD
Motif
Other DBs
NCBI-ProteinID:
QGY41101
UniProt:
A0A6I6JG01
LinkDB
All DBs
Position
2968663..2970576
Genome browser
AA seq
637 aa
AA seq
DB search
MSTSNLTAKYRPQTFAEVAGQDAIKAILSRAAATDKVAPAYLFSGTRGVGKTTIARIFAK
ALNCVNAPTAEPCNQCPNCRQITAGVAVDVIEIDGASNRGIDDARRLKEDIGYAPVECRY
KVFIIDEAHMLTKEAFNALLKTLEEPPPRATFIMATTEPHKFPPTIISRCQHYIYKMLTR
QELVTHLEKIMNREGLQFEQAALEIIAKRGAGSVRDSMSLLGQALAMGTDVLREEEVRSF
LGLAGQDVFFQLMEAMHARDLVAVGMVLRQVLDQGLDLGFFLRELTNCWRNMFLLRQAGE
AALPLLGFSGEEARTWLDWAGRFDPAHIHACWQMTLDGQRRVMTSLEPAMALELLLLNLT
SLPDLIELESVGAAAPSGGNVPPRPMGGQGGPQGGGRFGGQTGGQGAPQGGPGGYAPPGG
QRFAPPRAQAAPLNREPEPAPPQAPPRPSAPPPSQPYSQPPSGVEMSRPQQESVPPTPPP
SPKAEPAATPERRAEDGGDYTASGRMAESVGKSVASAPSGPRDWNGFLEFVAARNGHSGV
NSTRLRLNEGKVEKDRLVITCSSRVQCEYLSESAVNSALDNLVREYFGPMVEVNVETGDI
AVRKSDRQLWEEAEANPSVIKVMEAFSAQLISVGARE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcgaatctcactgccaagtaccgtccgcagaccttcgcggaagtggccgga
caggatgcgataaaagcgatcctctcccgcgccgcagccacagacaaggtggcgccggcc
tacctgttttccggcacgcgcggagtgggcaaaaccaccatcgcgcgcatctttgccaaa
gcactgaattgcgtgaacgcacccaccgccgagccctgcaaccagtgtcccaactgcagg
cagatcacggctggcgtggccgtggacgtcatcgagatcgacggcgcttccaaccgaggc
atcgacgacgcccggcggctcaaggaggatattggctacgcgccggtggagtgccgctac
aaggtcttcatcatcgacgaagcgcacatgctgaccaaggaagcgttcaacgcgctcctc
aagacccttgaagagccgccgccgcgcgccaccttcatcatggccaccaccgagccgcac
aagttccctccgaccatcatcagccgttgccagcattacatatataagatgttgactcgg
caggagcttgtaacccatctcgaaaagatcatgaatcgggaagggctgcagttcgagcag
gccgccctggagatcatcgccaagcgcggtgcgggcagcgttcgcgattccatgtccctg
ttgggtcaagccctggccatggggacggatgtgctccgcgaagaggaggtgcgttccttt
ctcgggctggccggacaggacgtctttttccagctcatggaggccatgcacgcccgtgac
cttgtggccgtgggcatggtgctgcgtcaggtcctggaccagggactggacctcggtttc
tttttgcgggagttgaccaactgctggcgcaacatgtttctgctcaggcaggcgggggag
gcggccctcccgcttctcgggttttccggtgaggaagcccggacctggctggactgggcc
gggagattcgatcctgcgcacattcacgcctgctggcagatgaccctggatggtcagcgc
agggtcatgaccagcctggaaccggccatggccttggagctcttgctgcttaacctgacc
agcctcccggacctgatcgagctggaatcggtcggtgctgcggccccgtccggaggcaac
gttccaccgcgtcccatgggcgggcagggcggtccgcagggtggcggcaggttcggcgga
cagaccggcgggcaaggtgcgccccagggcggccccggcggctatgcccctccgggcggg
cagcgttttgcaccgcctcgggcgcaggccgcgcccctgaaccgtgaaccggaaccggcg
cctccccaggctccgccccggccatcggcaccgccgccgtcgcaaccatactcccagccc
ccctccggggtcgagatgtcacggccgcaacaggagtctgtcccccctacgccgcccccg
tctccaaaggctgaaccggccgctacgccggaacgccgggctgaagacgggggagactac
accgcttccggccgtatggctgaatctgtcgggaaatccgttgcgagtgcgccttccggc
cctcgcgattggaacggatttctcgaatttgttgctgcgcgcaacgggcattcgggagtc
aactccacgcggttgcggctgaatgagggcaaagtggaaaaagatcggctggtcatcacc
tgttccagccgggtccagtgcgagtacctgagcgagagcgcggtaaactccgccctggac
aacctggtcagggaatattttggccccatggttgaagttaacgtcgaaactggcgatatc
gccgtccgtaaatcggacaggcagctatgggaagaggccgaggccaacccgagcgtgatc
aaggtcatggaggccttttccgctcagttgatttcggtcggtgcccgggaataa
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