Pseudodesulfovibrio cashew: GM415_13605
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Entry
GM415_13605 CDS
T06353
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel02020
Two-component system
psel02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GM415_13605
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GM415_13605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psel02035
]
GM415_13605
Bacterial motility proteins [BR:
psel02035
]
Flagellar system
Chemotaxis proteins
MCPs
GM415_13605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
Lebercilin
DUF6627
CovS-like_HAMP
PriC
T2SSF
Motif
Other DBs
NCBI-ProteinID:
QGY41119
UniProt:
A0A6I6JJ06
LinkDB
All DBs
Position
complement(2995512..2997536)
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AA seq
674 aa
AA seq
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MSIKWKLLLMVSLPIAAIVIIFGVGLSSFYNINSAMSEVNSLHLDRATMNAADRDAYQAQ
VAIMHVLKADSQEELQGAQKDSEENLTQTWERIMGPAENFTPEMASNLDSFKAGYAEWKR
RNEEIVSLSNETLASNQMRDQAEKKALDSFDAMRDVVNNLGEMIDGELRDQYLDPTRRVR
LEEALSKVLNADRDAYQAYVAQLLITRAKDIETVIKLSNSFVENVGQTRERVVSGCDIVG
GKASTLKSDFLRLFSAWQGNSDQVVELTRANVEKNLRKISLLQESGERFSTMRDSVDKLG
DMEMSRVERRLEDLDNIINRTILIYVLATILFIILSVITTLVVATRIANVMKQSAQVSTA
LSQGDFSVKLDVRRNDEIGQLADAIRSMIEKLSGIVLEVQNASTMVAAGSEELASSSQAL
SQGATEQASAVEEVSSSMEEMTSSISQNTDNSGTTESIARKTAEEARKGGEAVRKTRDSM
SLIAEKINIIEEIARQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAEKSGQAANEIS
ELSTESMEVANEAGEMLNSIVPNIEKTAELVQEITAASSEQNVGASEINAALQQLDSVVQ
SNAGSSEEIASTAEELASQATLLKQTMAFFKLGRTMVAPMTREKATQASPIPIEKEPKQT
GLALEMDDDAFERF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaaatggaagttgctgttgatggtaagcctgcccatagccgcaattgtcatt
attttcggggtaggattatccagtttctacaatattaatagcgcaatgagtgaggtgaat
tcccttcacctcgaccgtgccaccatgaacgccgccgaccgcgatgcctaccaggcgcaa
gtggccataatgcatgtgctgaaagcggattctcaagaagaattgcaaggcgcccaaaaa
gatagcgaggaaaacctgacgcagacctgggaacgcattatgggcccagccgaaaatttc
actccggaaatggcctctaacctcgatagcttcaaggcagggtacgccgagtggaaaagg
aggaacgaggaaatcgtctccctgtccaacgaaacgctggcaagcaatcaaatgcgagac
caagccgaaaaaaaggcgctggattcgttcgacgccatgcgcgatgtagtcaacaatctt
ggagaaatgattgacggtgaattgcgagaccaatacctcgacccaacccgtcgcgtgcgt
ttggaggaagctctttccaaggttctcaatgcagaccgagacgcctatcaggcctatgtg
gctcaattgctcataaccagggccaaggacatcgaaaccgtaatcaagctttcaaactcc
ttcgtcgagaacgttggtcagaccagggaaagggtcgtttccggttgtgacatagtagga
ggaaaggcttcgacattaaagagcgatttcctcaggctcttctccgcgtggcagggaaat
agcgaccaggtggtggaactgacgcgggccaatgtagagaaaaatctgcgcaagatatcc
ttgctgcaggaaagcggtgaacgcttttccaccatgcgcgacagcgtcgacaagctcggc
gatatggaaatgtctcgcgttgagagacggcttgaagatctggacaacatcattaacaga
acgatcctcatctacgtcctggcaaccatactgttcattattctttccgtcattactacc
ctggtcgtcgcaacgcgcatagccaatgtcatgaagcaaagcgcccaagtatccacagcc
ctttcgcagggagacttctctgtcaagctcgacgttaggcgtaacgacgagatcggccaa
ctggccgacgccatcaggagcatgatagagaagctgagcggcattgtccttgaagtacaa
aacgcaagcaccatggttgcggcgggcagcgaagaactggccagctcatcccaggctctc
agtcagggagctacggaacaggcctccgccgtggaagaggtctcttcctccatggaggag
atgacctcaagcatcagccagaacacggacaattctggcacaaccgaatccattgcccgg
aagaccgccgaagaggcccgcaagggcggcgaagccgttcgcaagaccagagactccatg
tctctgatcgccgaaaagatcaatatcatcgaagaaatcgccaggcagacaaatctgctg
gcgctgaacgcggcaatcgaagccgcgcgggcaggagaacacggcaagggctttgcggta
gtcgccgccgaagtacgaaagctggcggaaaagtcgggccaggcagccaacgaaatcagc
gaactgtccacggaatcaatggaagtggccaacgaagctggagaaatgcttaattccatc
gtcccgaacattgagaagaccgctgaactcgtacaggagatcacggccgcaagcagtgag
cagaatgtcggcgcttccgagatcaatgctgctttgcagcaactggatagcgtcgtccaa
tccaacgcaggctcttcagaggaaatcgcctccacggcagaagagctggcctcccaagcc
acgctcctcaagcagaccatggcctttttcaagcttggaaggacaatggttgcacccatg
acgagagaaaaggcgactcaggcttccccgatccccatcgaaaaggaaccgaagcaaacc
gggctcgccctggaaatggatgacgacgcttttgaacgcttctaa
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