Pseudodesulfovibrio cashew: GM415_13725
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Entry
GM415_13725 CDS
T06353
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psel03032
]
GM415_13725
03036 Chromosome and associated proteins [BR:
psel03036
]
GM415_13725
03400 DNA repair and recombination proteins [BR:
psel03400
]
GM415_13725
DNA replication proteins [BR:
psel03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GM415_13725
Chromosome and associated proteins [BR:
psel03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GM415_13725
DNA repair and recombination proteins [BR:
psel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GM415_13725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_1
DUF5666
Motif
Other DBs
NCBI-ProteinID:
QGY41141
UniProt:
A0A6I6JG42
LinkDB
All DBs
Position
complement(3016511..3016786)
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AA seq
91 aa
AA seq
DB search
MNKSELIKALSEQKKMHVDEATKVVGAFVDSVKEALLRGDRVEIRGFGSFKIKDYEGYTG
RNPKTGSVVQVRPKKLPFFRPGKELKEYIND
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagcgaattgatcaaggctctgtccgaacagaagaaaatgcacgttgacgag
gccaccaaggtggtcggagccttcgtggattccgtgaaggaagctctgctgcgcggcgac
cgggttgaaattcgcggcttcggaagcttcaagatcaaggactacgaggggtacacggga
cgtaatcccaaaaccggaagcgtcgtccaggtccgccccaaaaagctccccttcttccgt
cccggaaaagagctgaaagaatacatcaacgattag
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integrated database retrieval system
