KEGG   Pseudodesulfovibrio cashew: GM415_14400
Entry
GM415_14400       CDS       T06353                                 
Name
(GenBank) HD domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
psel  Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:psel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psel03019]
    GM415_14400
Messenger RNA biogenesis [BR:psel03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GM415_14400
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2
Other DBs
NCBI-ProteinID: QGY41266
UniProt: A0A6I6JEI9
LinkDB
Position
3156340..3157380
AA seq 346 aa
MARLVTQKSQYIQDLTPGTQVGDIFLLAAANLAQSRNGPYWNLTFQDATGKVDGKIWSPK
SQEYPSLEPGQMARVHGFVENYRDKNQLKVDHLELIAPAPGEIDFADFLPASNIPPAELL
EALEDLITEHMKHTPWKNFCRKVLGDEEIRARLLVAPGAKTVHHAYVGGLLEHTLQVARA
CMALCDVYPALDRQTLLAGAVFHDLGKAWELSGGLTNDYTDEGRLLGHIQLGMEKIDIFL
NKNKRLDDKLKLHFKHLITSHHGEHEFGSPVRPKTPEAFILHFADNMDAKLNIIDQAYAD
MDKTGAEWSPYMRFLERNVFRTPATPDKSKQKNDKPENQCLLPLKA
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggcaagattagtgacacaaaagtcgcaatatattcaagacctgacccccggcacccag
gtgggagatatttttcttctggctgcggccaacttggcccagtccagaaacggcccatac
tggaatctgacatttcaagacgcaaccggcaaggttgacggcaagatttggtcacccaag
agccaggaatacccttccctggagcccggacagatggcccgcgtccatggcttcgtggag
aattaccgtgataagaatcagctcaaggtcgatcacctggagttgatagcacccgcgccc
ggggaaatcgatttcgccgacttcctgcccgcttcaaacatcccgcctgcggaactcttg
gaggctctggaagacctgatcacggaacacatgaagcatactccatggaagaatttctgc
cgcaaggtgctgggggatgaggaaatccgtgcccgcctgctcgttgctccaggagccaaa
accgttcaccacgcctacgtcggcggccttctggagcatacccttcaggtggcgagggcc
tgcatggccctgtgcgacgtctaccctgccctggaccgccagaccctactcgccggagcc
gtgttccatgatctgggcaaggcctgggagctgtctggcggtttgaccaatgattatacc
gatgaaggccgcctcctcggccatatccagctcggcatggaaaagattgatattttccta
aataaaaacaaaagactggatgacaagttaaagcttcactttaagcacctgatcaccagc
catcacggcgagcacgagttcggttcaccggtccgccccaaaacgcccgaggccttcatc
ctccactttgcggacaatatggacgccaagctcaacatcatcgatcaagcctacgcggac
atggataagacgggcgcggagtggtccccgtatatgcgtttcctggaacgcaacgtcttc
cgcactccggcgactcccgacaaatccaaacagaaaaacgacaagccggagaaccaatgt
ttattacctttgaaggcatag

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