Pseudodesulfovibrio cashew: GM415_14400
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Entry
GM415_14400 CDS
T06353
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psel03019
]
GM415_14400
Messenger RNA biogenesis [BR:
psel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GM415_14400
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QGY41266
UniProt:
A0A6I6JEI9
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Position
3156340..3157380
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AA seq
346 aa
AA seq
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MARLVTQKSQYIQDLTPGTQVGDIFLLAAANLAQSRNGPYWNLTFQDATGKVDGKIWSPK
SQEYPSLEPGQMARVHGFVENYRDKNQLKVDHLELIAPAPGEIDFADFLPASNIPPAELL
EALEDLITEHMKHTPWKNFCRKVLGDEEIRARLLVAPGAKTVHHAYVGGLLEHTLQVARA
CMALCDVYPALDRQTLLAGAVFHDLGKAWELSGGLTNDYTDEGRLLGHIQLGMEKIDIFL
NKNKRLDDKLKLHFKHLITSHHGEHEFGSPVRPKTPEAFILHFADNMDAKLNIIDQAYAD
MDKTGAEWSPYMRFLERNVFRTPATPDKSKQKNDKPENQCLLPLKA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcaagattagtgacacaaaagtcgcaatatattcaagacctgacccccggcacccag
gtgggagatatttttcttctggctgcggccaacttggcccagtccagaaacggcccatac
tggaatctgacatttcaagacgcaaccggcaaggttgacggcaagatttggtcacccaag
agccaggaatacccttccctggagcccggacagatggcccgcgtccatggcttcgtggag
aattaccgtgataagaatcagctcaaggtcgatcacctggagttgatagcacccgcgccc
ggggaaatcgatttcgccgacttcctgcccgcttcaaacatcccgcctgcggaactcttg
gaggctctggaagacctgatcacggaacacatgaagcatactccatggaagaatttctgc
cgcaaggtgctgggggatgaggaaatccgtgcccgcctgctcgttgctccaggagccaaa
accgttcaccacgcctacgtcggcggccttctggagcatacccttcaggtggcgagggcc
tgcatggccctgtgcgacgtctaccctgccctggaccgccagaccctactcgccggagcc
gtgttccatgatctgggcaaggcctgggagctgtctggcggtttgaccaatgattatacc
gatgaaggccgcctcctcggccatatccagctcggcatggaaaagattgatattttccta
aataaaaacaaaagactggatgacaagttaaagcttcactttaagcacctgatcaccagc
catcacggcgagcacgagttcggttcaccggtccgccccaaaacgcccgaggccttcatc
ctccactttgcggacaatatggacgccaagctcaacatcatcgatcaagcctacgcggac
atggataagacgggcgcggagtggtccccgtatatgcgtttcctggaacgcaacgtcttc
cgcactccggcgactcccgacaaatccaaacagaaaaacgacaagccggagaaccaatgt
ttattacctttgaaggcatag
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