Pseudodesulfovibrio cashew: GM415_14495
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Entry
GM415_14495 CDS
T06353
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel03420
Nucleotide excision repair
psel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GM415_14495
03430 Mismatch repair
GM415_14495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psel03400
]
GM415_14495
Enzymes [BR:
psel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GM415_14495
DNA repair and recombination proteins [BR:
psel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GM415_14495
MMR (mismatch excision repair)
Other MMR factors
GM415_14495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DEAD
AAA_11
AAA_22
HHH_5
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QGY41284
UniProt:
A0A6I6JUA8
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All DBs
Position
3174029..3176173
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AA seq
714 aa
AA seq
DB search
MSIDIDNELNEAQREAVLATEGPVLVIAGAGSGKTRTIVYRLAHLVEQGVDPAQILLLTF
TRKAAQEMLSRAETILGRPLTGTSGGTFHSFAYATLRRNAADIGFDNGFTLMDRADSENI
CKEVKDALKLGKGDRSFPKKATLLDMITKSRNKELTIDAVMEREAYHLSPYLDAVTEIAD
GYARFKREHALVDYDDLLFLLDKLLAENEPLRNQLQARYRYIMVDEYQDTNLVQARIVKH
LAGTKGNVMAVGDDAQSIYAFRGANVANILEFPKIFEGAKVIRLEQNYRSVQPILDLTNQ
ILAGATTKFDKNLYSDLKSDVLPEVVHPLSDQTQARLVVDAVLEFQRKYMLHDIAVLFRA
GYQSFPLEVALTRIGIDYQKFGGIRFHEAAHIKDVLSYLRLTLNPHDLLAWQRAMDHIKG
VGPKTVTKIYQAIHTNDEKYLVKMTKKHDTLRELLNELNALRAMPPKPSAVLERILAFYQ
PILMEKYPDDYPKRQAGLEQLSQIAVSYSDMDQFLGDLSLDGDPDEEKRKENAVVLSTVH
SAKGLEWSAVIIIDLVEDRFPSRRAMQRAEDLEEERRLMYVACTRAKQCLKLFVPSSVYN
RASGMSDPTLPSPFVLELPGDVFQRVNESYGGGLERKQMQKTPGATPSPRHDYGDETAST
SAASPKVDPSKLGFCKHKIFGKGKIIAQPEPNKFKVNFPGFGIKTIIGDYLELL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagacatagacaacgaactcaacgaggcccaacgggaggccgtactggccacc
gaaggccccgtgctggtcatcgccggagcgggttcgggcaagactcggacaatcgtctac
cgcctggcccacctggtggaacagggagtggacccggcccagatcctgctgctgaccttt
acccgcaaagccgcccaggagatgctttcccgagccgaaaccatcctcggacgccccctg
accggcaccagcggcggcacctttcactccttcgcctacgccaccctccgacgcaacgcc
gcggacatcggcttcgacaacggcttcacgctcatggaccgcgcggacagcgaaaacatc
tgcaaggaagtgaaggacgcgctcaagctgggcaagggggaccgctccttccccaagaag
gctaccttgctggacatgatcaccaagtccagaaacaaggaactgaccatcgatgccgtc
atggagcgcgaggcctaccacctctcgccctatctggacgcagtcacggagatcgcggac
ggctacgcacgtttcaagcgcgagcacgccctggtggactacgacgacctgctcttcctg
ctcgacaaactgctggcggaaaacgagccgctgcgcaaccagctccaggcccgctaccgc
tacatcatggtcgacgagtaccaggacaccaacctggttcaggcacgcatcgtcaagcac
ctggcaggcaccaaaggcaacgtcatggccgttggcgacgacgcccagtccatctacgcc
ttccgtggagccaacgtcgccaacattctggaatttccaaaaattttcgaaggcgctaag
gtcatcaggcttgagcagaactaccgttcggtgcaacccattctggacctgaccaaccaa
atcctggccggggccaccaccaagttcgacaaaaacctctactcggacctgaagagcgac
gtgttgcccgaagtggttcatcccctgagcgaccaaacccaggcccgactggttgtggac
gcggtgcttgagtttcagcgcaagtacatgctgcacgacatcgcggtcctgttccgcgct
ggctaccagtccttccctcttgaagtggccctgacccgcataggcatcgattatcagaag
ttcggcggcatacgcttccacgaggccgcgcacatcaaggatgtgctctcctatttgcgg
ctcactctcaacccgcatgacctcctggcctggcaacgggccatggatcacatcaaggga
gtcgggcccaagaccgtaacgaaaatctatcaggccatacacacgaacgacgagaagtac
ctggtcaagatgaccaagaagcacgatacgctccgcgaactgctcaatgaactcaacgcg
ctgcgcgcaatgccgcccaaaccgtccgccgtgctggaacggatactcgccttctaccag
cccattctcatggaaaaatacccggacgactaccccaaacgacaggccgggctggaacag
ctctcccagatcgccgtgagttattcggacatggaccagttcctgggcgacctcagcctc
gatggcgatccggacgaagaaaaacggaaggaaaacgcggtagtcctgtctactgtgcac
tctgccaagggcctcgaatggtccgcagtgatcatcatcgacctggtggaggaccgattc
ccctcgcgcagggccatgcagcgcgccgaggacctggaagaggaacgccgcctcatgtac
gtggcctgtacccgggccaagcaatgcctcaagctgttcgtgccgagctcggtctacaac
cgagccagcggtatgtccgacccgaccctgcccagcccctttgtgctggaactgcccggt
gatgtgttccagcgcgtcaacgagtcttacggcggcggcctggaacggaaacaaatgcag
aaaactccaggcgcaacgccatctccacgtcatgattacggcgatgaaacggcatcaacc
tccgcagcttcgcccaaggtcgacccctccaagctcggcttctgcaaacataagattttc
ggcaagggaaaaattatcgcccagccggagcccaacaagttcaaagtcaactttcccggc
ttcggcatcaagaccatcatcggcgactatctggaactcctctaa
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