Pseudodesulfovibrio cashew: GM415_15765
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Entry
GM415_15765 CDS
T06353
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel03030
DNA replication
psel03430
Mismatch repair
psel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM415_15765 (ssb)
03430 Mismatch repair
GM415_15765 (ssb)
03440 Homologous recombination
GM415_15765 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psel03032
]
GM415_15765 (ssb)
03400 DNA repair and recombination proteins [BR:
psel03400
]
GM415_15765 (ssb)
03029 Mitochondrial biogenesis [BR:
psel03029
]
GM415_15765 (ssb)
DNA replication proteins [BR:
psel03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GM415_15765 (ssb)
DNA repair and recombination proteins [BR:
psel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
GM415_15765 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
GM415_15765 (ssb)
Mitochondrial biogenesis [BR:
psel03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
GM415_15765 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
AfAlkA-like_TBP-like
Thiol_cytolys_C
SKG6
Motif
Other DBs
NCBI-ProteinID:
QGY41513
UniProt:
A0A6I6JN54
LinkDB
All DBs
Position
complement(3444799..3445350)
Genome browser
AA seq
183 aa
AA seq
DB search
MAGSMNKVILIGRVGQDPKVSYTSSGQAVANFSVATDEGYRDRQTGQKVERTEWHRIVAW
RQQAEFVGNYIGKGRLVLVEGKLQTRKWQGQDGQDRYTTEIVADNIQGLDRVPDGQYNQA
GQQGGYQQQQQQGGYQQQGGGYQQQQGGYQQSPQQNQGQPQQQEEDLGPAFPSEASGMDD
VPF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggctggcagcatgaacaaagtgatcctcatcgggcgggtcggacaggaccccaaggtc
tcctatacgagttccggacaggcggtcgccaacttttccgtcgccacggatgagggatac
cgcgaccggcagaccggccagaaagtggagcggaccgagtggcaccgcatcgtggcttgg
cggcagcaggccgagttcgtcggtaactacatcggcaagggccgtctggtcttggtcgaa
ggcaagcttcaaacccgcaagtggcagggccaggatggtcaggaccgttataccacagag
attgtggccgataatatccaggggctcgaccgcgtgccggatggccagtacaatcaggcc
ggacagcagggcggctaccagcagcaacagcagcagggtggctaccagcagcagggtggt
ggttatcagcagcaacagggcggctaccaacagtctcctcagcagaatcagggccagccg
cagcagcaggaagaggacctcggtcccgccttcccgtccgaagccagcggcatggatgac
gtgcctttctaa
DBGET
integrated database retrieval system
