Pseudodesulfovibrio cashew: GM415_16230
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Entry
GM415_16230 CDS
T06353
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel00970
Aminoacyl-tRNA biosynthesis
psel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GM415_16230 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
psel03029
]
GM415_16230 (gatB)
Enzymes [BR:
psel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
GM415_16230 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
GM415_16230 (gatB)
Mitochondrial biogenesis [BR:
psel03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
GM415_16230 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
YjbR
Mistic
YqeY
Motif
Other DBs
NCBI-ProteinID:
QGY41602
UniProt:
A0A6I6JMX4
LinkDB
All DBs
Position
complement(3541852..3543285)
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AA seq
477 aa
AA seq
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MSRYETVIGLEVHAQLKTESKIFCSCSTKFGVDPNENVCAVCSGMPGVLPVLNEKVAEFA
AKMGLATNCEVNLKSVFARKNYFYPDLPKGYQISQFELPICEHGHVDIEVEGEKKRIGLT
RIHMEEDAGKNIHSAADNASFVDLNRTGVPLIEIVSEPDMRSAEEAVAYLKELRSILLYL
GICDGNMEEGSFRCDANVSVRPYGQEEFGTRAELKNLNSFKHIQKAIEYEVERQIDLVED
GEKVVQETRLYNVEKGTTHSMRGKEEAHDYRYFPDPDLVPLVLEEDWVARWQSELPELPT
DKRERFIDEYKLADYDAALLTGELAVADYYEEAVEAYGGEAKKVTNWVVGELLPFCNDTG
TEACDCKLSPEKMAALLKLVDDGTISVKIGKDAFRDLCESGDDPAEYVKAKGLVQMSDTG
ELEAMVDKVLADNPGEVEAYKGGKTKLMGFFMGQVMRLSKGQANPGIVTQLIQKKLS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctacgaaaccgttatcggtcttgaggtgcacgcgcagctcaagacggagtcc
aagattttctgctcctgttccaccaagttcggggtggaccccaacgagaacgtgtgcgcc
gtgtgctccggcatgcccggtgtattgcccgtgctcaacgagaaggtggccgagttcgcc
gccaagatgggactggccaccaactgcgaggtcaatctcaagtccgtgttcgcgcgcaag
aactatttctatcccgatctgcccaagggataccagatttcccagttcgagctgcccatc
tgcgagcacggtcacgtggacatcgaggtggagggcgagaagaagcgtatcggcctgacc
cgtatccacatggaagaggacgcgggcaagaacatccactccgctgccgacaacgccagt
ttcgtggacctcaaccgcaccggcgtgcccctcatcgagatcgtctcggagccggacatg
cgctccgccgaggaggccgttgcctacctcaaggagctccggtccatcctgctttacctg
ggcatctgcgacggcaacatggaggagggcagcttccgctgcgacgccaacgtttctgtc
cgtccctacgggcaggaagagttcggcacacgcgccgagttgaagaacctcaactccttc
aagcacatccaaaaggccatcgagtacgaggtggagcgccagatcgatctggtggaggac
ggcgagaaggtggtgcaggagacaaggctctataacgtggaaaagggcactactcactcc
atgcgcggcaaggaagaggcccacgactaccgctatttcccggacccggatctggtcccg
ctggtgcttgaagaggactgggtggcccgctggcagtccgaactgcccgaactgcccacg
gataagcgcgagcggttcattgacgagtacaagctggccgattacgacgcggccctgctg
accggcgagctggctgttgccgactattacgaggaggccgtggaggcctacggcggcgag
gccaagaaggttaccaactgggtggtgggcgaattgttgccgttctgcaatgacaccgga
accgaggcatgcgactgcaagctctccccggagaagatggccgcgttgctcaaactggtg
gacgacggcaccatctccgtgaagatcggcaaggacgccttccgcgacctgtgcgagtcc
ggcgatgaccctgcggaatacgtcaaggccaaggggttggtccagatgtccgacaccgga
gagctggaagccatggtcgacaaggtgctggccgacaatcccggcgaggtggaagcctac
aagggcggcaagaccaagctcatgggtttcttcatgggccaggtcatgcgtctctccaag
ggccaggccaaccccggcatcgtcacccagctcattcaaaagaaactttcgtag
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