Pseudodesulfovibrio cashew: GM415_16695
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Entry
GM415_16695 CDS
T06353
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
psel03110
]
GM415_16695 (clpB)
Chaperones and folding catalysts [BR:
psel03110
]
Heat shock proteins
HSP100
GM415_16695 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
AAA_14
Sigma54_activat
nSTAND3
TniB
IstB_IS21
AAA_23
AAA_24
ATPase_2
AAA_7
NACHT
AAA_18
RNA_helicase
Zeta_toxin
Roc
ABC_tran
T2SSE
NBD_SMAX1
LonB_AAA-LID
Motif
Other DBs
NCBI-ProteinID:
QGY41691
UniProt:
A0A6I6JHM9
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Position
complement(3637432..3640029)
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AA seq
865 aa
AA seq
DB search
MDPNTFTKKTQDAVSEAQNLAIRSGHQQIDCEHLLRALVAQEQGLVPQILRKLGVPTDTY
LGAVDAEIAKLPSVSGPGARPDQIMVTQRLQKVLVSADDKAKRMKDEFVSVEHIFLSLME
EPASTGVGRVNKQFGLDKDKVLQALTEVRGKQRVTSDNPEATYDSLKKYGRDLVEEARSG
KLDPVIGRDGEIRRVIRILSRRTKNNPVLIGEAGVGKTAIAEGLAQRIVAQDVPEGLKEK
TVFSLDMGSLIAGAKYRGEFEERLKAVLKEVAESAGQIIMFIDEIHTIVGAGKTDGAMDA
GNLLKPMLARGELHCIGATTTDEYRKYIEKDPALERRFQTVTVEEPSVEDTISILRGLRE
RFEVHHGVRISDGAVVEAAVLSHRYITDRQLPDKAIDLIDEAAALIRTEIDSQPYELDKA
NRHIMQLEIEREALKRETDAASKDRLKKLEKDLVDLKERQAALLAQWENEKSGIERLRSL
KEDIESTRREIEEAKRVHDYNRAAELEYGKLGSLEKELNDRNEALEAGETPRMVKEEVGP
DDVAQVIARWTGIPVSKLMEGEREKLLRLADVLHERVIGQDQAVQAVADAVLRARAGLKN
PSRPIGSFIFLGPTGVGKTELCKTLAASLFDTEDNMVRIDMSEYMEKHTVARLIGAPPGY
VGYDEGGQLTEAVRRKPYSVILFDEIEKAHHDVFNVLLQILDDGRLTDSHGRTVDFKNTI
VIMTSNLGAEYMLDGIDPQGEFREGVEGQVMEVLRRHFRPEFLNRVDETVLFRPLTSAQL
VKIIDLLVAGLRDRLSERKIELELTDAAKGFIAESAYDPSFGARPLHRYLQAHLETPLAK
LLIGGELADGSKVTVDEVDGELAFV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaatactttcactaaaaaaacgcaggatgccgtttccgaggcacagaattta
gctattcggagcgggcaccagcagatagattgcgaacacctgttgcgcgccctggtggcg
caggaacaggggctggtgccccagatcctgcgcaagctcggcgtgcccaccgacacctac
cttggggccgtggacgcggagatagccaagctgccgagcgtctccggacccggcgcgagg
cctgaccagatcatggttactcagcggctccagaaggtgctcgtctcggccgacgacaag
gccaagcgcatgaaggacgagttcgtctcggtggagcacatctttctcagcctgatggag
gaacctgcctccaccggggtgggccgcgtcaacaagcagttcggcctggacaaggacaag
gtcctccaggccctgacggaagtgcgcggcaagcagcgcgtgacctcggacaaccccgag
gccacctatgattcgctcaagaaatacggccgcgatctggtggaggaggcgcgctcgggc
aagctcgatccggtcatcggccgggacggggagatccgccgcgtcatccgcatcctgtcc
agaaggacaaagaacaacccggtgctcattggtgaggccggcgtcggcaagaccgccatc
gccgaggggctcgcccagcgcatcgtggcacaggatgtacccgaggggctcaaggaaaag
accgtcttctccctggacatgggctcgctcatcgccggggccaagtaccgcggcgagttc
gaggaacgtctcaaggccgtgctcaaggaagtggccgagtccgccggacagatcatcatg
ttcatcgacgagatccacaccatcgtgggcgcgggcaagaccgacggggccatggacgcg
ggtaacctgctcaagcccatgctggcccgtggcgagttgcactgcatcggcgcgaccacc
acggacgagtaccgcaagtacattgagaaggacccggccctggagcgtcgtttccagacc
gtgaccgtggaagagccgagcgtggaggacaccatctcaatcctgcgcggcctgcgcgag
cggttcgaggtccaccacggcgtgcgtatctctgacggcgcggtggtcgaggccgccgtg
ctttcgcaccgctacatcaccgaccggcagctcccggacaaggccatcgacctcatcgac
gaggccgcagccctgatccgcaccgagatcgattcccagccctatgagctggacaaggcc
aaccggcatatcatgcagctcgagatcgagcgcgaggccctcaagcgggagaccgacgcc
gcatccaaggaccggctgaagaagctcgaaaaggacctggttgatctcaaggaacgacag
gcggccctgttggcccagtgggagaacgagaagtccggcatcgagcggcttcgctccctc
aaggaggatatcgaatccacccgccgggagatcgaggaagccaagcgcgtccacgattac
aaccgtgccgccgagctggagtacggcaagctcggctcgcttgaaaaggaactcaacgac
cgcaacgaggccctggaggcgggggagaccccgcgcatggtcaaggaggaggtcggcccc
gacgacgtggcccaggtcatcgcccgctggacaggcatcccggtctccaagcttatggag
ggcgaacgggagaagctgctccgactggctgacgtgctgcacgagcgggtcatcggtcag
gaccaggcggttcaggccgttgccgacgctgtgctccgcgcgcgggccgggctcaagaat
ccgtcgaggcccatcggttcgttcattttcctgggccccaccggcgtgggcaagaccgaa
ctctgcaagaccctggccgcctcgctctttgataccgaggacaacatggtgcgcatcgac
atgtccgagtacatggaaaagcacaccgtggcccggctcatcggagcgcctcccggctac
gtggggtacgacgaaggcggccaactgaccgaggccgtgcgccgcaagccgtactcggtc
atcctgttcgacgagatcgagaaggcgcaccacgatgtgttcaacgtcctgctgcagatt
ctcgacgacggcaggctgactgactcccacggacgcaccgtggacttcaagaacaccatc
gtgatcatgaccagcaacctcggggccgagtacatgctcgacggcatcgacccccagggc
gaattccgcgagggcgtggagggtcaggtcatggaggtcctgcgccgccacttcaggccc
gagttcctcaaccgcgtggacgagaccgtgctcttcaggccgcttacctccgcgcagttg
gtcaagatcatcgatctgctggtggccgggctgcgcgacaggctcagcgaacgcaagatc
gagctggagctcaccgacgcggccaaggggttcatcgccgagtccgcctacgacccgagc
ttcggcgcgcgtcccctgcaccgctacctccaggcccacctggagacaccgttggccaag
ctgctcatcggcggcgaactggccgacggttccaaggtgactgtggatgaagtggacggg
gagttggcgtttgtgtaa
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