Pseudomonas sp. MRSN12121: TO66_01015
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Entry
TO66_01015 CDS
T03702
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem00250
Alanine, aspartate and glutamate metabolism
psem00310
Lysine degradation
psem00350
Tyrosine metabolism
psem00650
Butanoate metabolism
psem00760
Nicotinate and nicotinamide metabolism
psem01100
Metabolic pathways
psem01120
Microbial metabolism in diverse environments
Module
psem_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
TO66_01015 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TO66_01015 (gabD)
00310 Lysine degradation
TO66_01015 (gabD)
00350 Tyrosine metabolism
TO66_01015 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
TO66_01015 (gabD)
Enzymes [BR:
psem01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
TO66_01015 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
TO66_01015 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
TO66_01015 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AJO75931
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Position
222168..223610
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AA seq
480 aa
AA seq
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MQLKDAQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAVETRRAIEAADKA
LPAWRALTAKERATKLRRWYELLIENQDDLGRLMTLEQGKPLAEAKGEIAYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVIK
PASQTPFSALALVELAHRAGIPKGVLSVVTGSAGDIGGELTSNPTVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDS
VYDAFAEKLKAAVAKLKIGNGLEEGTTTGPLIDEKAVAKVQEHIADALGKGATLLAGGKS
IEGNFFEPTILVNVPKDAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacgcccagttgttccgccagcaagcctttatcgatggggcttgggtc
gacgcggacaatggtcagacgatcaaagtgaacaacccggccaccggcgaaatcctcggc
actgtgccgaagatgggcgctgtggagacccgccgggccatcgaagccgccgacaaggcc
ctgccggcctggcgcgcgctgaccgccaaggagcgggcgaccaagctgcgtcgctggtac
gagctgctgatcgagaaccaggacgacctcggccgcctgatgaccctggaacagggcaag
ccgctggccgaagccaagggtgagatcgcctacgccgcctccttcatcgaatggttcgcc
gaagaagccaagcgcatctacggcgacgtgattcccggccaccagccggacaaacgcctg
atcgtgatcaagcagccgatcggcgtgaccgcagccatcaccccgtggaacttcccggcg
gcgatgatcacccgtaaagccggcccggccctggccgctggctgcaccatggtgatcaag
ccggcttcgcagacgccgttctccgccctggccctggtcgaactggcgcaccgcgccggt
atcccgaaaggtgtgctcagcgtggtcaccggcagcgccggcgacatcggcggcgagctg
accagcaacccgaccgtgcgcaagctgtcgttcaccggctcgaccgaaatcggtcgccag
ctgatggccgaatgcgccaaggacatcaagaaagtctccctggagctgggcggcaacgca
ccgttcatcgtgttcgacgacgcggacctggataaggccgtcgagggcgcgatcatctcc
aaataccgcaacaacggtcagacctgcgtctgcgccaaccgcctgtacatccaggattcg
gtctacgacgcgttcgccgagaaactgaaagcggccgtggccaagctgaagatcggcaac
ggcctggaagagggcaccaccaccggcccgctgatcgacgaaaaagccgtggccaaggtc
caggaacatatcgccgacgccctgggtaaaggcgcgacgctgctggcgggcggcaagtcc
atcgaaggcaacttcttcgagccgaccatcctggtcaacgtgccgaaagacgcggccgtg
gccaaggaagaaaccttcggcccgctggcgccgctgttccgtttcaaggacgaagccgaa
gtgatcgcgatgtccaacgacaccgagttcggcctggcttcctacttctacgcccgcgac
ctgggccgtgtgttccgtgtggccgaggccctggaatacggcatggtcggcgtcaacacc
gggctgatctccaacgaagtcgcgccgttcggcggcatcaaggcgtcgggcctgggccgt
gaaggctccaagtacggcatcgaggactacctggaaatcaaatacctctgcctgggcatc
tga
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