KEGG   Pseudomonas sp. MRSN12121: TO66_02145
Entry
TO66_02145        CDS       T03702                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
psem  Pseudomonas sp. MRSN12121
Pathway
psem03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TO66_02145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psem03400]
    TO66_02145
Enzymes [BR:psem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TO66_02145
DNA repair and recombination proteins [BR:psem03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     TO66_02145
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C Zn_ribbon_PriA Zn_ribbon_6 AAA_30 HypA AAA_16 PriA-like_WH iSirtuin TrwB_AAD_bind nSTAND3 PIF1 AAA_22 Zeta_toxin ADDB_N
Other DBs
NCBI-ProteinID: AJO76142
UniProt: A0A0C5EDP2
LinkDB
Position
complement(483793..486012)
AA seq 739 aa
MPDAILRLALPSPLRRLFDYRAPAGVRRAQLHPGMRLRVPFGRREMIGILVEVTDSSEVP
ADKLKPALALLDATPPLPPTLFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEVRQER
FWSVSPGARLDDPRIARAPRQREALATLAQHPHGVPHALLSKLMLSKDSLDLLLAKDLVQ
VEVRRHAPGERHEHWLAQPELPLNSEQRAAYEAIRSGFDSYHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYSGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECERCDARMTVHQRYGELRCHHCGHSERVPRHC
PQCGKVDLRPVGAGTERAEERLAILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSEAERLLAQMNLGGIELLGPVPAPMERRAGRYRAQLLLQASARAPLHKLLSHWLLLLEQ
MPSGRQVRWSLDVDPVDLY
NT seq 2220 nt   +upstreamnt  +downstreamnt
gtgcccgacgccatcttgcgcctcgccctgccctcgcccctgcgccgcctgttcgactat
cgggccccggccggcgtgcggcgcgcccaactgcatccgggcatgcgcctgcgcgtgccg
ttcgggcgccgggagatgatcggcatcctggtcgaggtgaccgacagcagcgaagtcccg
gccgacaagctcaagccggcgctggccctgctggatgccaccccgccgctgccgcccacg
ctgttcaagctgtgcctgtggacggcgcagtattaccagcacagcctcggcgacaccctg
agctgggcgctgccggtactgctgcgccagggcgagccggccgaggtgcgccaggagcgc
ttctggtcggtcagccccggcgcccgcctcgacgacccgcgcatcgcccgcgcccctcgc
cagcgcgaggcactggcgaccctggcccagcatccacacggcgttccccatgcgttgctg
agcaaactgatgctgagcaaggacagcctcgacctgttgctggccaaggatctggtccag
gtggaggttcgccggcacgcccccggcgaacgccacgaacactggctggcccaaccggaa
ctgccgctcaacagcgaacagcgcgccgcctatgaagccattcgctcgggcttcgacagc
tatcacgccttcctgctggccggggtcaccggcagcggcaagaccgaggtctacctgcaa
ctgatccgcgaaaccctggaggccggcaagcaggccctggtgctgatcccggaaatcaac
ctcggcccgcagaccctggcgcgcttcgagcagcgcttcaatgcccgcatcgccctgctg
cactcggccgtcaatgaccgtgagcgcctggacgcctggctggcggcacgcgacggcgag
gccgacattattatcggcacccgctcggcgctgttcaccccgatgaagaatcccgggctg
atcatcatcgacgaagaacacgacggctcctacaagcagcaggaaggcctgcgctaccac
gcgcgcgacctggccctggtccgcgcgcgccaggaaaacatccccatcgtgctgggttcc
gctacaccgtcgctggaaagcctgcacaacgcctacagcggccgctacgggctgctgcgg
ctgaacgagcgggccggcggcgccaagcagccgcgcttcctgcgcctggacgtgaaaagc
cggccgctggacagcggcatctccggccccatgcaacaagccatcggccagaccctggcg
gcgggccagcaggtgctggtgttcctcaaccgccggggtttcgcgccgaccctgctgtgc
catgactgcggctggatgtccgagtgcgagcgctgcgatgcgcggatgaccgtgcaccag
cgctacggcgagctgcgctgccaccattgcggccacagcgaacgcgtgccgcggcattgc
ccgcagtgcggcaaggtcgacctgcgcccggtcggcgccggcaccgagcgcgccgaagag
cggctggcgatcctgttcccggactacccggtgctgcgggtcgaccgcgacagcacttcg
cgcaaggacgcgatgaaccagctgttcgccacgatccagaagggccagccgtgcatcctg
gtgggcacccagatgctcgccaaggggcaccacttcccacgggtgaccctggtgtcgatc
ctcgacgccgacggcggcctgttctccggcgacttccgcgccagcgagcgcatggcgcag
ttgatcgtccaggtcgccggacgggccgggcgagccgaagagcccggcaaggtgattatc
cagacacacctggccgaccatccgctgctggtgcaactgaccgagcagggctatttcgcc
tttgccgagcaagccttgagcgaacgccgcgccgccggcctgccgccgttcgcccatctg
gccctgttgcgcgccgaggcgcacaagccgggacaggccgaaggctttctcgacgaagcc
tgcagcgaggccgaacgcctgctggcgcagatgaacctgggcggcatcgagttgctgggg
ccggtgccggcgcccatggagcggcgtgccggacgctatcgcgcgcaactgttattgcag
gccagcgcccgggcgccgctgcacaagttgctgagccactggctgctgctcctcgaacag
atgcccagcgggcgccaggtacgctggtcgctggatgttgaccctgtggacctgtattga

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