Pseudomonas sp. MRSN12121: TO66_03555
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Entry
TO66_03555 CDS
T03702
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TO66_03555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psem03400
]
TO66_03555
Enzymes [BR:
psem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TO66_03555
DNA repair and recombination proteins [BR:
psem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TO66_03555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
NAT10_TcmA_helicase
SH3_13
AAA_22
Viral_helicase1
UvrD-helicase
AAA_17
SLFN-g3_helicase
AAA_28
AAA_16
AAA_5
T2SSE
NTPase_1
nSTAND3
PhoH
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
AJO76412
LinkDB
All DBs
Position
816301..818370
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AA seq
689 aa
AA seq
DB search
MNEDLLTPLDPQHDLAPLVRADDLLVLLDRWVERGWLRALDKAFVSFLHELEPQGDPLVL
MAAALTSHQLGHGHVCLDLFETLKEPDFALSLPPEGDQPGTATVLPSQVLATLDGAHWCK
TLAASDLVALAADPGEQARQRPLVLSGKRLYLRRYWSYERRIDHALRQRLAVREDTPTDL
AERLAGLFGTAKGAGPVDWQKLACALATRGAFSIITGGPGTGKTTTVVRLLALLQAPAVE
AGKPLRIRLAAPTGKAAARLTESISLQVRSLSVADGVREKIPSDVTTVHRLLGNRPGTRH
FRHHAGNRLPLDVLVVDEASMIDLEMMANLLDALPMHARLVLLGDKDQLASVEAGAVLGD
LCRDAEAGWYTPQTRQWLEAVSGERLADSGLQEDVTGSHPLAQQVVMLRHSRRFGEGSGI
GQLARWVNQQQAEEARRLLAARSHADLYGLSLKGEQDRTLERLLLEGHGDGPQGYRHYLS
LLRSQRPPAGTALEDPRWTEWARDVLSAFDQFQLLCAVRKGPWGVEGLNQRITAALFKAR
LIESDQQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPEHEGGQDGRLVLRVAFPRNDGQG
GVRFVLPSRLNDVETVYAMTVHKSQGSEFAHTALILPEVLNPVLTKELIYTGITRAKDWF
SLIEPRAGVFEEAVRRKVKRLSGLMLDLG
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaggatctgctgactccgctggacccccagcacgacctggcccccctggtgcga
gccgacgacctgctggtgttgctcgaccgttgggtcgagcgtggctggctgcgtgcgctg
gacaaggcttttgtgtcttttctccatgaactggagccgcaaggcgatccgctggtgttg
atggccgcggcgctgaccagccatcaactgggccacgggcatgtctgcctggacctgttc
gagacgctcaaggagccggatttcgccctgtccctgccgccggaaggggatcagccaggc
accgccacggtgttgccgtcacaagtgctggcgacgctggacggtgcgcactggtgcaag
accctggcggccagcgacctggttgcgctggcggccgatccgggcgagcaggctcgccag
cggcctttggtgctgtcgggcaaacgcctttacctgcgccgttactggagctacgaacgg
cgcatcgaccatgccttgcgccagcgcctggcggtgcgcgaggacactcccacggacctg
gccgagcgcctggctggcctgttcggaacagccaagggggcgggaccggtcgattggcag
aagctggcctgcgccctggctacccgcggtgcgttcagcatcatcaccggcggtccgggc
accggcaagaccaccacggtggtgcgtctgctggccctgcttcaggccccggcggtcgag
gccggcaagccattgcgtatccgcctcgcggcgcctaccggcaaggcggcggcgcggctg
accgagtccatcagcctgcaagtgcgttcgctgtcggtcgccgacggcgtgcgcgagaag
atccccagtgacgtgaccacggtgcaccggctgttgggcaatcgtcccggcacccggcac
ttccgccatcatgccggcaaccgcctgccgctggatgtgctggtggtggacgaagcctcg
atgatcgacctggagatgatggccaacctgctcgatgccctgccgatgcatgcgcgcctg
gtcttgctgggggacaaggaccaactggcctcggtggaggccggcgcggtgcttggcgac
ctgtgccgggatgcggaggcggggtggtacaccccgcagacccgtcaatggctcgaggcg
gtcagtggcgagcggctggcggacagcggcttgcaggaggacgtgacaggcagccaccca
ttggcccagcaggtggtgatgctgcgccactcccggcgtttcggcgagggcagcggcatc
ggccagctggcgcgctgggtcaatcagcaacaagccgaggaggcccgccgcctgctggcc
gcccgcagccatgccgacctgtatggcttgagcctcaagggcgagcaggatcgaaccctg
gaacgcttgctgctggaaggccatggcgacgggccgcagggctaccggcattacctgagc
cttttgcgcagccagcgcccgcctgccggcacggcgctggaagatccccgctggacggaa
tgggcccgcgatgtgctgtcggcgtttgaccagttccagttgctctgtgcggtgcgcaag
gggccctggggtgtcgaggggctgaaccagcggatcaccgccgccttgttcaaggcgcgc
ctgatcgaaagcgaccagcagtggtacgaaggtcgcccggtgctgatgacgcgcaacgat
tacggcctggggttgatgaacggcgacatcggcatcgcgctcaagctgccggaacacgaa
ggggggcaggacgggcgcctggtcctgcgcgtggccttcccgcgcaacgatggccagggc
ggggtgcgtttcgtgctgccaagccggctcaacgacgtggaaaccgtgtacgccatgacc
gtgcacaaatcccagggctcggagtttgcccacaccgcgttgatcctgcccgaggtgctg
aacccggtgctgaccaaggagctgatctataccggcatcacccgggccaaggactggttc
agcctgatcgaaccgcgggccggggtgttcgaggaggccgtgcggcgcaaggtcaagcgc
ctgagcgggttgatgctcgacctggggtga
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