KEGG   Pseudomonas sp. MRSN12121: TO66_05265
Entry
TO66_05265        CDS       T03702                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
psem  Pseudomonas sp. MRSN12121
Pathway
psem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TO66_05265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psem03019]
    TO66_05265
Enzymes [BR:psem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     TO66_05265
Messenger RNA biogenesis [BR:psem03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     TO66_05265
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25
Other DBs
NCBI-ProteinID: AJO76724
UniProt: A0A0C5DX85
LinkDB
Position
complement(1181908..1183386)
AA seq 492 aa
MTVLKALKKIFGKSEAEQLAPGPSPSSSSPSSRTDGHQPERTAPATAPRKEPTPPAAPAT
QSAPRGDKPKAEQPRRPRAPKPPVSTWKLEDFVVDPQEGKTRFHDFKLAPELMHAIHDLG
FPYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRAL
IIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLD
FNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMN
LAKQWTTDPAIVEIEAENVANANVEQHIYAVASADKYKLLYNLVNDNGWERVMVFANRKD
EVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISH
VINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPSIEALLGRKISCEMPPTE
LLRPVERKRPKA
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgaccgtgctcaaagcactcaagaaaatcttcggtaaaagcgaggctgagcagctcgcg
ccaggccccagcccttcttcctccagtcccagcagccgcaccgacggccatcagccggaa
cggaccgcgcctgccaccgccccccggaaagaaccgacgccccctgccgccccggccacg
cagagcgccccgcgcggcgacaagcccaaggccgagcagccgcgccgcccgcgcgcgccg
aagccgccggtgagcacctggaaactggaagatttcgtcgtcgacccccaggaaggcaag
acccgcttccatgacttcaagctcgccccggagctgatgcacgcgatccacgacctgggt
ttcccctactgcacgccgatccaggcgcaggtcctgggcttcaccctggccggcaaagac
gccatcggccgcgcccagaccggtaccggcaagaccgccgcgtttctgatctcgatcatc
acccagctgctgcagaccccgccgccgaaagagcgctacatgggcgagccgcgggcgctg
atcattgccccgacccgcgagctggtggtgcagatcgccaaggacgccgcggcgctgacc
aaatacaccggcctcaacgtgatgacctttgtcggcggcatggacttcgacaagcagctc
aagcagctcgaagcccgccattgcgacatcctggtcgccacgccaggccgcctgctggac
ttcaaccagcgcggcgacgtgcacctggacatggtcgaagtgatggtgctggacgaagcc
gaccgcatgctcgacatgggtttcatcccacaagtacgccagatcattcgccagaccccg
ccgaaaagcgaacgccagacccttctgttctccgccaccttcaccgacgacgtgatgaac
ctggccaagcagtggaccaccgacccggccatcgtcgagatcgaagccgagaacgtggcc
aacgccaacgtcgaacagcacatctatgcggtggccagcgccgacaagtacaagctgctg
tacaacctggtcaacgacaacggctgggaacgggtgatggtcttcgccaaccgcaaggat
gaggtgcggcgcatcgaggaacgcctggtgcgcgatggcgtgaacgccgcccagctgtcc
ggcgacgtgcctcagcacaagcgcatcaagaccctggaaggtttccgcgaaggcaagatt
cgcgtgctggtggccaccgatgtcgccggtcgcggcatccacatcgacggcatcagccac
gtgatcaacttcaccctgccggaagtgccggacgactacgtgcaccggatcggtcgtacc
ggccgggcgggcgccgatggcgtgtccatcagcttcgccggcgaggatgactcctatcag
ctgccgtcgatcgaagcgctgctggggcgcaagatcagttgcgagatgccgccgaccgag
ctgttgcgccccgtggagcgcaagcgcccgaaggcctga

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