Pseudomonas sp. MRSN12121: TO66_05595
Help
Entry
TO66_05595 CDS
T03702
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem03410
Base excision repair
psem03430
Mismatch repair
psem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TO66_05595
03430 Mismatch repair
TO66_05595
03440 Homologous recombination
TO66_05595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psem03400
]
TO66_05595
DNA repair and recombination proteins [BR:
psem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TO66_05595
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TO66_05595
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TO66_05595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AJO76789
UniProt:
A0A0C5DXI7
LinkDB
All DBs
Position
1255673..1257382
Genome browser
AA seq
569 aa
AA seq
DB search
MRIEPRELPATLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGIDAAVDLL
VTALEQGERILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQRQPRLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGQELPAADAIVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGWYASRPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIRAILEVAKREASRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLSQDMALAREMASQLDELNQDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDADWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVPGFHIRDALDAVAARHPELISKFGG
HAMAAGLSLPEQNFPAFAEAFDVEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLRSECGSVKLDGIAFGIDRDIWPNPTIR
WVELAYKLDLNEFRGQETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccccgtgagttgcccgccaccctgccattcctcggtgacctgccgccc
ctgctgactcgcctgtacgccgcgcgtggcgtgcagtccgaggccgagctggacaagagc
ctggcgcggctgatcccgttccagcagctcaagggcatcgacgccgcggtggacctgctg
gtgacggcgctggagcagggcgagcgcatcctgatcgtcggcgatttcgatgccgacggc
gccaccgccagtaccgtgggggtgctcggcctgcgcctgctgggcgcggcccatgtcgac
tacctggtgccgaaccgtttcgagtacggctacggcctgaccccggaaatcgtcgccgtg
gccctgcagcgccagccccggctgctgattaccgtggacaacggcatctccagcgtcgaa
ggcgtggccgcggccaaggcggcggggctgaaagtgctggtcaccgaccaccacttgccg
ggccaggaactgccggcggccgatgccatcgttaacccgaaccagcccgggtgcgaattc
ccgagcaaggcgctggccggggtcggggtgattttctatgtgctgatggcgctgcgcgcc
cgtctgcgcagcctcggctggtacgcaagccggcctcagccgaatatcggcgagctgctg
gacctggtggcgctgggcagtgtcgccgacgtggtgccgctggacgccaacaaccgcatc
ctggtgcaccaggggctggagcggattcgcgccgggcgtgcgcggccgggtatcagggcg
atccttgaagtggccaagcgcgaggcgtcgcgcatcacctccaccgacctggggttcatc
ctcggcccgcgactgaacgccgccgggcgcctggacgacatgagcctgggcatcgaatgc
ctgctcagccaggacatggccctggcccgggaaatggccagccagctggatgagctgaac
caggaccgcaaatccatcgagcagggcatgcagcgcgaggccctggcccagctcaaggat
ctgccggtggagtcgatgccgttcggcctgtgcctgttcgacgccgactggcaccagggc
gtgatcgggattcttgcctcgcgcctgaaggagcgctatcaccggccgaccatcgccttc
gccgacgccggcgagggcatgctcaagggctcggcgcgttcggtgccgggctttcatatc
cgcgatgcgctggatgcggtcgcggcccggcatccggagctgatcagcaagttcggcggc
cacgccatggcggccggcctgtcgctgccggagcagaatttcccggccttcgccgaagcc
ttcgacgtcgaggtccgtcgccagctgcgcgaggaagacctgaccggacgcctgctgtcg
gacggcaccctggcggtggaagaattccacctcgaactggcccgggccctgcgccatgcc
ggcccctggggccagcacttccccgagccactgttccacggcgtgttccagttggtggag
cagcgcgtggtcggcgagcgccacctcaaggtcgtgctgcgcagcgagtgcggctcggtg
aagctcgacggcatcgcctttggcatcgaccgcgacatctggccgaacccgaccatccgc
tgggtggagctggcctacaagctcgacctcaacgagttccgcggccaggaaacggtgcaa
ttgatgattgcccatatcgagccccgctga
DBGET
integrated database retrieval system