Pseudomonas sp. MRSN12121: TO66_05970
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Entry
TO66_05970 CDS
T03702
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem03030
DNA replication
psem03430
Mismatch repair
psem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TO66_05970
03430 Mismatch repair
TO66_05970
03440 Homologous recombination
TO66_05970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psem03032
]
TO66_05970
03400 DNA repair and recombination proteins [BR:
psem03400
]
TO66_05970
Enzymes [BR:
psem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TO66_05970
DNA replication proteins [BR:
psem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TO66_05970
DNA repair and recombination proteins [BR:
psem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TO66_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AJO76863
UniProt:
A0A0C5DSK3
LinkDB
All DBs
Position
1338800..1342321
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLAGMGMPAVAVTDQNNMCSLVKFYKAAMGTG
IKPICGADLWLPNKDPDGPLSRISLLVMNAAGYRNLTELISRGFIEGQRNGQIIIEREWV
VEAAEGLIMLSAAKEGEIGMALVAGDLQEAENLAREWMAVFPDRFYLEVQRTSRPNDEEQ
LHAAVALADKIGAPLVATNDVRFIKREDFEAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMAELFSDLPEALENTVEIAKRCNIDVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLAVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMALKLEGITRGTGKHAGGVVIAPTKLTDFSPISCDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALATINRDRAKTGEAPLDIAFIPLDDKPTYS
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHPDYQYEGLQPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCAGNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVNDEGRIVYGLGAI
KGVGEGPVEAITEARAEGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP
KAYQASIDQNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYASHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIVDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQALLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKVHTEALKGDQLRWLGELCKRHRGACPISMEYTREDAKAL
LQFGEAWRIDPADALIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatattccctggttgacggcctg
gtgcggatcaagccgctggtcaagacgttggccggcatgggcatgcccgcggtggcggtc
accgaccagaacaacatgtgttccctggtcaagttctacaaggccgcgatgggcaccggg
atcaagccgatctgtggcgccgacctgtggttgccgaacaaggaccccgacggtccgttg
agccgtatcagcctgctggtgatgaacgctgccggttaccgcaacctgactgagctgatt
tcccgcggcttcatcgaaggccagcgcaatggccagatcatcatcgagcgcgagtgggtg
gtcgaggcggccgaaggcctgatcatgctgtcggccgccaaagagggcgagatcggcatg
gcgctggtcgccggcgacctgcaagaagcggaaaacctggcgcgcgagtggatggcggtg
ttcccggaccgcttctatctggaagttcagcgcaccagccgccccaacgacgaagaacaa
ttgcacgcggccgtggccctggcggacaagatcggtgcgccgctggtggcgaccaacgat
gtgcgcttcatcaagcgcgaagacttcgaggcccacgaaacccgggtttgcatcggcgaa
ggccgggccctcgatgacccgcgccgctcgaagaactatagcgaccagcagtacctgaaa
agcgccgaggaaatggccgagctgttcagcgacctgcccgaggcgctggaaaacaccgtc
gagatcgccaagcgctgcaacatcgacgtgaagctgggcaagcacttcctgcccaacttc
ccgattcccgatggcatgaccatcgacgagtactttcgcaaggtgtccttcgacgggttg
gaagaacgcctcgcggttctgctgcccaaggacaccaccgaggattacgaggccaagcgc
caggtatatgtcgaccgcctgaatttcgagctggatatcatcatccagatggggttcccc
ggttacttcctgatcgttatggactttatccagtgggccaagaacaacggcgtaccggtg
gggccgggccgggggtcgggtgccggatcgctggtggcctatgtgcagaagatcaccgac
ctcgacccgctggaatacgacctgctgttcgaacgtttcctcaacccggaacgggtttcc
atgcccgacttcgacgtcgacttctgcatggacggccgcgaccgggtcatcgactatgtg
gcggaaaaatatggccgcaacgccgtaagccagatcatcaccttcggctccatggccgcg
aaggcggtggtgcgcgacgtggcgcgggtacaaggcaagtcctatggcctcgccgaccgc
ttgtcgaagatgattcctttcgaagtcggcatgaccctggaaaaggcctacgagcaggaa
gaaatcctgcgcgactttatcaaggtcgatgaagaggcggcggaaatctgggagatggcc
ctcaagctcgagggcatcacccgtggtaccggcaagcacgccgggggcgtggtgatcgcg
cccaccaagctcaccgacttctcgcccatttcctgcgacgaagagggtggcggcctggtg
acccagttcgacaaggacgatgtcgaggctgccggcctggtgaagttcgacttcctcggc
ctgcgcaccctgacgatcatcgactgggcgctggctaccatcaaccgggaccgggccaag
accggcgaggcgccgctggatatcgcctttatcccgctcgacgacaagccgacctacagc
ctgctgcaaaaagccgaaaccaccgcggtgttccagcttgaatcccggggcatgaaagag
ctgatcaagaagctcaagcccgactgcctggaagacctgatcgcactggtggccctgttc
cgtccggggccgctgcaatcgggcatggtggacgacttcatcaaccgcaagcacgggcgc
gccgaactggcgtacccgcacccggactatcagtacgaagggttgcagccggtactggct
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtcatggcc
gggtataccctcggcggcgcggacatgctgcgtcgagccatgggtaagaaaaaacccgag
gagatggccaagcagcgcggcggtttcatcgagggttgcgccggtaacggtatcgatgcc
gacctggcgggtaacattttcgacctggtggagaaattcgccggttacggcttcaacaaa
tcccactccgcggcctacggcctggtttcctaccagacggcctggctcaaggctcactac
ccggcgcctttcatggccgcggtactgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcggaccatgaagctgcgcctggacgccccggacgtgaacacg
tccgagttcaagttcacggtgaacgacgaaggccgcatcgtgtacggcctgggggcgatc
aagggcgtcggcgaaggcccggtggaggcgattaccgaggcgcgtgcagaggggccgttc
aaggacctgttcgatttctgtgcccgggtcgacctcaagcgcatcaacaagcgcaccctg
gacggcttgattcgcagcggtgcgctggaccgtctggggccatacttccatgacgagccg
aaagcctaccaggcgagcatcgaccagaaccgcgcggtcctgctggcggcgatggaagaa
gcgatcaaggcggcggaacagacggcccgcacccatgacagtgggcatgcggacctgttc
ggcggcctgttcgtggaagaggatgccgatgtctacgcgagccaccgcaaggccaaggag
ctgacgctcaaggagcgcctgaaaggcgagaaggataccttgggcctgtacctgaccggc
cacccgatcgacgagtacgaaggggaaatccgccgtttcgcccggcagcgcatcgtcgac
ctgaagccggcgcgcgatacccagaccgtggcggggatgatcattgccctgcgggtcatg
aagaacaagaagggcgacaagatggggttcatcacccttgacgaccgttcgggccggatc
gaggcttcgctgttcgccgatgccttccattcggcgcaggcgctattgcagaccgacgcc
atggtggtggtcgagggcgaggtcagcaacgacgacttctccggcggcctgcgcctgcgg
gtcaagcgcgtgatgagcatggaggatgcccgcaccaacctggcggaaagcctgcggctg
aaggtgcacaccgaagccctcaagggcgatcagctacgctggctgggggaattgtgcaaa
cgtcatcgcggcgcctgcccgatctccatggaatacacccgggaggacgccaaggcattg
ctgcagtttggcgaagcctggcggatcgacccggcggatgccttgattcaagccttgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
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