Pseudomonas sp. MRSN12121: TO66_06355
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Entry
TO66_06355 CDS
T03702
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psem
Pseudomonas sp. MRSN12121
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psem03009
]
TO66_06355 (rimO)
Enzymes [BR:
psem01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TO66_06355 (rimO)
Ribosome biogenesis [BR:
psem03009
]
Prokaryotic type
ribosomal protein modification factors
TO66_06355 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
DUF5005
Motif
Other DBs
NCBI-ProteinID:
AJO76936
UniProt:
A0A0C5E069
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All DBs
Position
complement(1406836..1408173)
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AA seq
445 aa
AA seq
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MSTPTAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIREVHPSVLAVTGPQQYEQVVSAVHEVVP
PKQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKAWREICPE
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLETVPDEVK
QDRWERFMAHQQEISSARLQQRIGKEIEVLIDEVDENGAVGRCFFDAPEIDGNVFIDGAG
DLKPGDKVWCRVTDADEYDLWAEVL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctaccgcgccagccaaccccaaggtcggcttcgtttccctgggttgcccg
aaagcgctggtcgactccgagcgcatcctcacgcaactgcgtatggaaggttatgacgtg
gtgtccacctaccaggacgccgacgtcgtggtggtcaacacctgcggcttcatcgactcg
gccaaggccgaatccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtcaccggctgcatgggcgtggaagaaggcaatatccgcgaagtgcatccgagcgtgctg
gccgtgaccggcccgcagcagtacgaacaggtggtcagcgcggtgcacgaggtggtgccg
ccgaaacaggaccacaacccgctgatcgacctggtgccgccacagggcatcaagctgacc
ccacgccactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgtccggtgggcgacgtgctcgacgag
gcccagcgcctggtcaagtccggggtcaaggaactgctggtgatctcccaggacaccagc
gcctacggcgtcgacgtcaagtaccgcaccggtttctggaacggcgcgccggtgaaaacc
cgcatgaccgagctgtgcgaagccctcagcaccctgggtgtctgggtccgcctgcactac
gtctacccgtacccgcacgtcgacgagctgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtgctcaaggccatgaagcgc
ccggccttcgaagacaagaccctggcccgcatcaaggcctggcgcgagatctgccccgag
ctgatcatccgctcgaccttcatcgtcggcttcccgggcgagaccgaagaagacttccag
tacctgctcgactggctgaccgaagcccagctcgaccgcgtcggctgcttccagtactcg
ccggtggaaggcgcgccagccaacgacctggacctggaaactgtcccggacgaggtcaag
caggaccgttgggagcgtttcatggcgcaccagcaggaaatcagttcggcgcgcctgcaa
cagcgcatcggcaaggaaatcgaagtgctgatcgacgaagtcgatgagaacggtgcggtc
ggccgctgcttcttcgatgccccggaaatcgacggtaacgtgttcatcgacggtgccggc
gacctgaagcctggcgacaaggtctggtgccgggtgaccgacgccgacgagtacgacctc
tgggccgaagtcctctaa
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