Pseudomonas sp. MRSN12121: TO66_06660
Help
Entry
TO66_06660 CDS
T03702
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psem
Pseudomonas sp. MRSN12121
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psem03021
]
TO66_06660
Transcription machinery [BR:
psem03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
TO66_06660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AJO76992
LinkDB
All DBs
Position
complement(1472224..1475070)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DTITHFEGWKMTVREVDDVDGLLVYHGLNGQNETVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSPLWGLGGARAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
TNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEDQVSPEYALVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESDNYRPVAEAVQELLDN
GRLSPTAHQTIQGFLGNEGEALLAAVNDGDSEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPDEYLELPLGEHAELYPEVSFQAQPDAGEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEADDGQWQALIDEARAERERLE
AELHTGRDRLLELNSGGAGEGEALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSDNAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLAARVAF
ETLNDQLESVPKASANKFIQAQRDQLAPKINAGETKIAPRHAERVAEAQRRLAADTDEEL
ARLTALQAVNPSVRDSELEALRKQREQGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagccgagctaggt
ctaggcaccgttctggcacaggacggccgcttgctgaccgtgctctacccggccactggc
gacactcgccagtatgcgctacggaatgcgcccctcacgcgtgtgaggttttccccgggt
gacaccatcacccacttcgaaggctggaagatgaccgtgcgcgaagtcgacgacgtcgac
ggcctgctggtctatcacggcctcaacgggcagaacgaaaccgtcaccctgccggaaacc
cagctctcgaacttcattcagttccgcctggccagcgaccgtctgttcgccgggcagatc
gacccgctggcctggttctccctgcgctaccacaccctggaacacaccagccgccagctg
caatcgccgctgtggggcctgggcggcgcgcgcgcccagcctatcgcccaccagttgcac
atcgcccgtgaagtcgccgaccggatcgcaccgcgggtcctgctggcggacgaagtgggc
ctgggcaagaccatcgaagccggcctggtgattcatcgccagctgctgtcgggccgtgcc
agccgcgtgctgatcctggtcccggaaaacctgcagcaccagtggctggtggaaatgcgc
cggcgcttcaacctgcaggtcgcgctgttcgacgaagaacgtttcatcgaaagcgatgcc
accaaccccttcgaggacacccagctcgccctggtcgccctggaatggctggtggacgac
gagaaggcccaggacgcgctgttcgccgccggctgggacctgatggtggtcgacgaagct
caccacctggtgtggcacgaagaccaggtcagcccggaatacgcgctggtggaacagctg
gccgaagtcattcctggcgtcctgctgctcaccgccaccccggaacagctgggccaggac
agccacttcgcccgtctgcgcctgctcgatccgaaccgtttccacgacctcgccgccttc
cgcgccgagagcgacaattatcgcccggtggccgaagccgtgcaggaactgctggataac
ggccgcctgtcgccaaccgcgcaccagaccatccagggtttcctcggcaacgagggcgaa
gccctgctcgccgccgtcaacgatggcgacagcgaagccagcgcgcgcctggtgcgcgag
ctgctggaccgccacggcaccggccgcgtgctgttccgcaacacccgcgccgcggtgcaa
ggcttccccgagcgcaagctgcacccctacccgctgccatgcccggacgaatacctggag
ctgccgctgggcgaacacgccgagctgtacccggaagtcagcttccaggcccagccggac
gccggcgaagaagagcgctggtggaaattcgacccgcgggtcgagtggctgatcgaccag
ttgaagatgctcaagcgcaccaaggtcctggtgatctgcgcccacgcggaaaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcattccggccacggtgttccatgaaggc
atgaacatcctcgagcgcgaccgcgccgccgcctacttcgccgatgaggaatttggcgcc
caggtgctgatctgctcggaaatcggcagcgaaggccgcaacttccagttcgcccaccac
ctggtgctgttcgacctgccgtcgcacccggacctgctggaacagcggatcggccgtctc
gaccggatcggtcagaaacacgtgatcgagctgcatgtgccgtacctggaaaccagcccg
caagaacgcctgttccagtggtaccacgaggcgctgaacgccttcctcaatacctgcccg
accggcaacgccctgcagcatcagttcggcccgcgcctgctgccgctgctggaagaagcc
gacgacggccagtggcaagcgctgatcgacgaagcgcgcgccgagcgcgaacgcctggaa
gccgagctgcacaccggacgcgaccgcttgctggagctcaactccggcggtgccggcgaa
ggcgaggcgctggtggaggcgatcctcgaacaggacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgctttcggcatcgacagcgaagaccattcggacaacgccctg
atcctcaagccgagcgaaaaaatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgcaaccaggcgctgtctcgcgaagacatgcagttcatcacc
tgggagcacccgatggtgcaaggcggcatggacctggtgctgtccggctccatgggcaac
accgccgtggcgctgatcaagaacaaggcgctgaaacccggcaccgtattgctggaactg
ctgtatgtcagtgaggtggtggccccccgctcgctgcaactgggccgctacttgccgccg
gccgccctgcgctgcctgctggacgccaacggcaacgacctggccgcgcgcgtcgctttc
gagaccctcaacgaccagctggaaagcgttcccaaggccagcgccaacaagttcatccag
gcccagcgcgaccagctggcgccgaagatcaacgccggcgaaaccaagatcgccccgcgt
cacgccgagcgcgtggccgaagcgcaacgccgcctggccgccgacaccgatgaagagctg
gcgcgcctgaccgcgttgcaggcggtcaacccgagcgtgcgcgacagcgagctggaagcc
ctgcgcaagcagcgcgaacaaggcctggccatgctggagaaagcggcgctgcgcctggaa
gcgatccgggtgctggtagcgggctga
DBGET
integrated database retrieval system
