Pseudomonas sp. MRSN12121: TO66_07375
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Entry
TO66_07375 CDS
T03702
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psem
Pseudomonas sp. MRSN12121
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psem03016
]
TO66_07375
Enzymes [BR:
psem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TO66_07375
Transfer RNA biogenesis [BR:
psem03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TO66_07375
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AJO77126
UniProt:
A0A0C5E0L0
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All DBs
Position
1623162..1624295
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AA seq
377 aa
AA seq
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MAIDIHWIRDNDSLGQFCTEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGQRAYLIDPL
TIDDWQPLKALLENSAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY
SRLVQEVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVYTRLRPKLSADKYAWV
LEDGAELVANLRRETDPYEVYREAKLAWKLSRAQLAVLRELCAWREREARARDLPRNRIV
REHSLWPLAKSQPDSLGALAKIEDMHPRTVRQDGEFLLDLIKRAASVAPDQWPPAVPEPL
PMEASPLLKRLRAVGQAEAERLGIAPELMLRKKTLESLLKSGFPNGPYQLPDSLRGWRRE
LMGQALLDSLATAGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggattcgcgacaacgatagcctcggtcaattctgcaccgag
tggcagcagttgccattcgtcgccctcgacaccgaattcatgcgggtcgacaccttctat
ccgatcgccggcctgttgcaggtgggcgatggccagcgtgcttacctcatcgaccccttg
accatcgacgactggcagccgctgaaggcgctgctggagaacagcgcggtggtcaaggtg
gtgcacgcctgcagcgaggacctcgaagtcctgttgcgcctgaccggcagcctgccggcg
ccgctgttcgacacgcaactggcggccgcctacctgaacctgggtttctccatgggctat
tcgcggctggtccaggaagtgctgggcatcgagttgcccaagggcgagacccgttccgac
tggttgcagcgtccgttgtcggaaacccaggtcagctacgccgccgaagacgccgtgcac
ctggccgaggtctacacccgcctgcgcccgaaactgtccgcggacaagtacgcctgggtg
ctggaagacggtgccgaactggtggccaacctgcgtcgcgaaaccgacccctacgaggtc
taccgcgaggccaagctggcgtggaaactgtcccgcgcgcaactggcggtgctgcgcgag
ctctgcgcctggcgcgagcgcgaggcgcgggcgcgggacctgccgcgcaaccgcatcgtg
cgcgagcattcgctgtggcccctggccaagagccagccggacagcctcggcgccctggcg
aaaatcgaagacatgcacccgcgcaccgtgcgccaggacggcgagttcctgctggatctg
atcaagcgtgccgccagcgtcgctcccgaccagtggccgccggccgtccccgagccgctg
ccgatggaagcctcgcccctgctcaagcgcctgcgcgccgtgggccaggctgaagccgag
cgcctgggcatcgccccggaactgatgctgcgcaagaaaaccctggaaagcctgctcaag
agcggtttccccaacggaccttaccaattgcccgattcgctgcgtggctggcgccgcgaa
ttgatgggccaggcgctgctcgacagcttggccaccgccggagaacagccatga
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