Pseudomonas sp. MRSN12121: TO66_07680
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Entry
TO66_07680 CDS
T03702
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psem
Pseudomonas sp. MRSN12121
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psem03009
]
TO66_07680
Enzymes [BR:
psem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TO66_07680
Ribosome biogenesis [BR:
psem03009
]
Prokaryotic type
rRNA helicases
TO66_07680
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
AJO77185
UniProt:
A0A0C5E515
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All DBs
Position
1691537..1692883
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AA seq
448 aa
AA seq
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MFSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKVQAAMLRK
VPDILIGTPGRLIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVDECPNRQQTM
LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNETTRQQIITADHNQHKEQIVNWLLAN
ETYQKAIIFTNTRVMADRIYGRLVAQDYKAFVLHGEKDQKDRKLAIDRLKQGAVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNEGLAISLICHGDWNLMSSIER
YLKQNFERRTIKEVKGTYSGPKKVKASGKAAGTKKKKTDAKGDKKKTTAKAPTKRKTANR
PKSDSPALVSQDGMAPLKRRKPQAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttccgaattcgccctgcacgaacgcctgctcaaagccgtggccgagcttaaattt
gtcgagcctacgcctgtgcaggcagcggccattccgctcgcgctccaggggcgtgacctg
cgggtgacggcacagaccggcagcggcaagaccgcggctttcgtcctgccgatcctcaac
cgcctgatcggcccggcgaagatccgcgtcagcatcaagaccctgatcctgctgccgacc
cgcgagctggcccagcagaccctcaaggaagtcgagcgcttctcgcagttcaccttcatc
aaggccggcctgatcaccggcggcgaagacttcaaggtccaggccgccatgctgcgcaag
gtgccggacatcctgatcggcaccccgggccgcctgatcgagcaactgaacgccggcaac
ctcgacctcaaggaagtggaagtgctggtcctcgacgaagccgaccgcatgctcgacatg
ggctttgccgacgacgtgcagcgcctggtggacgaatgcccgaaccgccagcagaccatg
ctgttctcggccaccaccggcggctcgggcctgcgcgagatgatcgccaaggtcctgaac
aaccccgagcacctgcaactcaacgccgtcagccagctgaacgaaaccacccgccagcag
atcatcaccgccgaccacaaccagcacaaagagcagatcgtcaattggctgctggccaac
gagacctaccagaaggcgattatcttcaccaatacccgggtcatggccgaccgtatctac
ggccgcctggtggcccaggactacaaggcgttcgtgttgcacggcgagaaggaccagaag
gaccgcaagctggccatcgaccgcctgaagcagggcgcggtgaagatcctcgtcgccacc
gacgtggccgcccgtggcctggacgtcgacggcctggacctggtgatcaacttcgacatg
ccgcgcagcggcgacgagtacgtgcaccgcatcggtcgtaccgggcgcgccggcaacgag
ggcctggccatctcgctgatctgccatggcgactggaacctgatgtcgagcatcgagcgc
tacctgaagcagaacttcgagcgccgcaccatcaaggaagtcaaaggcacttacagcggg
ccgaagaaggtcaaggcttccggcaaggccgcgggcaccaagaagaaaaagaccgacgcc
aagggcgacaagaaaaagactacggccaaggccccgaccaagcgcaagaccgccaaccgg
ccgaaaagcgacagtccggcgctggtcagccaggatggcatggcgccgctcaagcgccgc
aagccacaggccccggccgccgagtaa
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