Pseudomonas sp. MRSN12121: TO66_08615
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Entry
TO66_08615 CDS
T03702
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem00260
Glycine, serine and threonine metabolism
psem00270
Cysteine and methionine metabolism
psem00450
Selenocompound metabolism
psem00670
One carbon pool by folate
psem01100
Metabolic pathways
psem01110
Biosynthesis of secondary metabolites
psem01230
Biosynthesis of amino acids
Module
psem_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TO66_08615
00270 Cysteine and methionine metabolism
TO66_08615
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
TO66_08615
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TO66_08615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psem04147
]
TO66_08615
Enzymes [BR:
psem01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
TO66_08615
Exosome [BR:
psem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
TO66_08615
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Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AJO77359
LinkDB
All DBs
Position
complement(1897298..1898476)
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AA seq
392 aa
AA seq
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MSHHDETGAPRAFATRVIHAGQAPDPTTGALMPPIYANSTYAQQSPGVHKGLDYGRSHNP
TRWALERCVADLESGTQAFAFASGLAAISSVLELLDAGAHIVSGNDLYGGTFRLFERVRR
RSAGHRFSFVDLSDLAAFEAALQDDTRMVMVETPSNPLLRLTDLAAIARICRARGIICVA
DNTFASPWIQRPLELGFDIVLHSTTKYLNGHSDVIGGIAVVGQNPDLAERLGFLQNAVGA
IAGPFDAFLTLRGVKTLALRMERHCSNALELAQWLERQPQVARVYYPGLASHPQHELARR
QMRGFGGMISLDLDCDLAGARRFLENVRIFALAESLGGVESLIEHPAIMTHASIPAETRA
QLGIGDGLVRLSVGVEDVEDLRADLAQALARI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaccacgatgaaaccggcgcaccgcgcgccttcgccacgcgggtcatccacgcc
gggcaggcgccggacccgaccaccggggcgttgatgccgccgatctacgccaattccacc
tacgcccagcagagccccggggtgcacaagggcctggactatggacgctcgcacaacccc
acgcgctgggcgctggaacgctgcgtggccgacctcgagagcggcacccaggctttcgcc
ttcgcctccgggctggcggcgatctccagcgtgctggagctgctcgatgccggcgcgcac
atcgtctccggcaacgacctgtacggcggtacgttccgtctgttcgagcgggtccgccgg
cgcagcgccgggcatcgtttcagcttcgtcgacctgtccgaccttgcggccttcgaagcg
gcgctgcaggacgatacacggatggtcatggtcgaaaccccgagcaatccgctgctgcgt
ctcaccgatctggccgccatcgcccgtatctgccgggcccggggcatcatctgcgtcgcc
gacaacaccttcgccagtccgtggatccagcgcccgctggagctgggcttcgatatcgtg
ctgcactcgacgaccaaatacctgaacggccattccgacgtgatcggcggcatcgcagtg
gtcggccagaatcccgacctggccgagcgcctgggcttcctgcagaacgcggtaggcgcc
atcgccgggccgttcgacgccttcctcaccctgcgcggagtgaagaccctggcgctgcgc
atggagcgccactgcagcaatgccctggagctggcgcaatggctggagcgccagccgcaa
gtggcgcgggtctattacccgggcctggcgtcgcacccgcagcatgaattggcgcgacgg
cagatgcgcggtttcggcgggatgatttccctcgacctggactgcgacctggccggcgcc
cggcgcttcctcgaaaacgtgcggatcttcgccctggccgaaagcctggggggcgtggaa
agcctgatcgagcacccggcgatcatgactcacgccagcatccccgccgaaacccgcgcc
cagctgggcatcggcgatgggctggtgcgtctgtcggtgggggtcgaggatgtcgaggac
ctgcgcgccgacctggcccaggcgctggcgcggatctga
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