Pseudomonas sp. MRSN12121: TO66_11770
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Entry
TO66_11770 CDS
T03702
Name
(GenBank) protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
psem
Pseudomonas sp. MRSN12121
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psem03009
]
TO66_11770
Ribosome biogenesis [BR:
psem03009
]
Prokaryotic type
ribosomal protein modification factors
TO66_11770
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
AJO77942
UniProt:
A0A0C5EIX1
LinkDB
All DBs
Position
complement(2554768..2556972)
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AA seq
734 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRDIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISEKDRLGILRSIDRCTVKKVVQT
GPEFVIEEVENLDADAQALLMPGLESGTRTCIAGKDLPLEQTIANMSAILADLGMKIEIA
SWRNIVPNVWSLHIRDAQSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGEE
IANAEFVHYPDERWFKPGPKDELPSEILDPYCLKIYNRDGELRGSHLIDTNSGNAERGIV
SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEF
ALPDVPQEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFEGQAVTEPNNFVEHFIDSSGVVSWRF
FSAQSDYEFVEWDFSGQGSDSNAQEAATLFGILEGMSKEAYMAVYEHLGATACRILVPDY
SEIYPVDDLIWDNTNKALFFREDILNLHRLDEDELQALLERLIDSELDDYTDITTLIGIE
FDDNTAWGQLTILELKLLIFLALQQYEEAKECVEMFLQYNDNTVERGLFYQAMNAVLEME
LDEDLDLADYEANFRRMFGNERMDAVIGSVQGSVRFYGLTPTNMQLEGLDRHLRLIDSYK
KLHAARARAAALSH
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaacctccggctcgaagccaagttcgacgacttc
acggtggtggcagaccagcccatccgctacaagggcgatggttcggcgccgggtccgttc
gactatttcctggcgtcgtcggccttgtgcgcggcgtacttcgtcaagctgtactgccag
acccgcgacatccccaccgacaacattcgcctgtcgcagaacaacatcgtcgacccggaa
aaccgctacaaccagatcttcaagatccaggtcgagctgccggcggacatctccgagaag
gaccgcctgggcatcctgcgctccatcgaccgctgcacggtgaaaaaggtggtgcagacc
ggtcccgagttcgtgatcgaggaagtggaaaacctcgacgccgatgcccaggccctgctg
atgccgggcctggagtcgggcacccgcacctgcatcgccggcaaggacctgccgctggag
cagaccatcgccaacatgtcggcgatcctcgcggacctggggatgaagatcgagatcgct
tcctggcgcaatatcgtgcccaacgtctggtcgctgcacattcgcgatgcgcagtcgccg
atgtgcttcaccaacggcaagggcgcgaccaaggaaggcgcgctggcgtcggccctgggc
gagttcatcgagcgcctgaactgcaacttcttctacaacgatcagttctggggcgaagag
atcgccaacgccgagttcgtccactacccggacgagcgctggttcaagccgggccccaag
gatgaactgcccagcgaaatcctcgacccctactgcctgaagatctacaaccgcgatggc
gaactgcgcggctcgcacctgatcgacaccaattccggcaacgcggagcgcggcattgtt
tcgctgccgttcgtgcgccagtcggatggcgaggtggtgtacttcccttccaacctgatc
gagaacctctacctcagcaacggcatgagcgccggcaacaccctggccgaagcccaggtg
cagtgcctgtcggagatcttcgagcgcgccgtcaaacgcgaaatcatcgaaggcgaattc
gccctgccggacgtgccccaggaagtgctggccaaataccctggcatcctggccggcatc
cagggcctggaggagcaaggcttcccggtgctggtcaaggacgcatccctgggcggcgaa
ttcccggtgatgtgcgtgaccctgatgaacccgcgcaccggcggcgtgttcgcctcgttc
ggcgcccacccgagcttcgaagtggcgctggagcgcagccttaccgaactgctgcagggc
cgcagtttcgagggcttgaacgacttgccgcagccgacgttcgaaggccaggcggtcacc
gagccgaacaacttcgtcgaacacttcatcgactccagcggcgtggtgtcgtggcgcttc
ttcagcgcccagtcggattacgaattcgtcgagtgggacttctccggccagggctcagac
tctaatgcccaggaagccgcgaccttgttcggcattctcgaaggcatgagcaaggaagcc
tacatggcggtgtacgaacacctgggcgccaccgcctgccgcatcctggtgccggactat
tcggaaatctacccggtggacgacctgatctgggacaacaccaacaaggcgctgttcttc
cgcgaagacatcctcaacctgcaccgcctcgacgaggatgagttgcaggcgctgctcgag
cgcctgatagacagcgagctcgacgactacaccgatatcaccaccctgatcggtatcgag
ttcgacgacaacaccgcctggggccaactgaccatcctggagttgaaactgctgatcttc
ctggccttgcagcaatatgaagaagccaaggaatgcgtggagatgttcctgcagtacaac
gacaacaccgtcgagcgtggcctgttctaccaggcgatgaatgcggtgctggagatggag
ctcgacgaagacctcgacctggcggactacgaagccaacttccgtcgcatgttcggcaac
gagcggatggacgcggtgatcggctcggtgcaaggcagcgtgcgtttttacggcctgacc
ccgaccaacatgcagttggaagggctcgatcgccacctgcgcctgatcgacagctacaag
aaactgcacgcggcgcgcgccagggcagcagccctctcgcactga
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