Pseudomonas sp. MRSN12121: TO66_13240
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Entry
TO66_13240 CDS
T03702
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TO66_13240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psem02000
]
TO66_13240
Transporters [BR:
psem02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
TO66_13240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
DUF4141
Motif
Other DBs
NCBI-ProteinID:
AJO78213
LinkDB
All DBs
Position
2885203..2886252
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AA seq
349 aa
AA seq
DB search
MKSKMLKHAACALSLSLLTSLGSARAAPDMVVVGYGGAGQKAQDVAFFQPFSASDGSRLI
QSEYNGEMARIKVMVDTGSVDWDLVQIEGPDLMRGCDEGLYERLDWQALGGSAQLITDAA
QACGSAALVWSVAIAYDTDKLAPGPASWADFWDVKRFPGKRGLRKRAVYNLEFALLADGV
PVDQVYAQLATPQGVDRAFAKLDQLKPYIQWWEAGAQPAQWLAAGDVTMTSTYSGRVAQA
AQAGSHLALVWPGSLYGMDYWAIIKGSRHAGQAKRFIAFANRPEAQVKYVEQIPYGPTNT
EAAARLDPRLAQWVPTAPQNLAGALAMDVAFWVDHGEELEERFNAWASR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaaatgctcaagcacgctgcctgcgccttgtcactgtccctgctgaccagt
ctcggcagcgcccgggcggcgccggacatggtggtggtcggttacggcggcgccgggcag
aaggcccaggacgtggcgttcttccagcctttcagcgccagcgatggcagtcggttgatc
cagagcgagtacaacggcgagatggcgcggatcaaggtcatggtcgacaccggcagcgtc
gactgggacctggtgcagatcgaaggcccggacctgatgcgcggctgcgacgaaggcctg
tacgagcgcctggactggcaggcgctgggtggcagcgcgcaactgatcaccgatgccgcg
caagcgtgcggctcggccgccctggtgtggagcgtggccattgcctacgacaccgacaag
ctggccccggggccggcgtcctgggcggacttctgggacgtgaagcgctttcccggcaag
cgcggcctgcgcaagcgcgcggtgtacaacctggagttcgccttgctggcggacggggtg
ccggtggaccaggtgtacgcccaactcgccacgccccagggggtcgaccgcgccttcgcc
aagctcgatcagctcaagccctacatccaatggtgggaggccggggcgcagccggcccag
tggctggccgccggcgatgtgacgatgacctccacctacagcggccgtgtcgcccaggcg
gcccaggccggcagccacctggcgctggtctggccgggcagcctgtacggcatggattac
tgggcgatcatcaagggctcccggcatgccgggcaggccaagcgcttcatcgccttcgcc
aaccggcccgaggcgcaggtcaagtacgtcgagcagattccctacgggccgaccaatacc
gaggccgcggcccggctcgacccgcgcctggcgcaatgggtgcccaccgccccgcagaac
ctggcgggtgcgctggcgatggacgtggcgttctgggtcgaccacggcgaggagctggag
gagcgcttcaacgcctgggccagccgatag
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