Pseudomonas sp. MRSN12121: TO66_17700
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Entry
TO66_17700 CDS
T03702
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psem
Pseudomonas sp. MRSN12121
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psem03032
]
TO66_17700
03400 DNA repair and recombination proteins [BR:
psem03400
]
TO66_17700
Enzymes [BR:
psem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TO66_17700
DNA replication proteins [BR:
psem03032
]
Prokaryotic type
DNA Topoisomerases
TO66_17700
DNA repair and recombination proteins [BR:
psem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TO66_17700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AJO79021
UniProt:
A0A0C5E6G9
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All DBs
Position
3924370..3925404
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AA seq
344 aa
AA seq
DB search
MPDSPLRPDLELPPELHYVDDSQPGISRRKRRGTFVYFDPQGQRIDDREQIQRINALAVP
PAYTDVWICADPQGHLQATGRDARGRKQYRYHPRWREVRDADKYSRLLQFGTALPSLRRR
LEALLAAPGFSRDKVMATVISLLDATLIRVGNSQYARDNRSYGLTTLRNRHVAIKGSSIL
FQFRGKSGIEHQITVKDPRLARILKRCLELPGQNLFQYLDENGERHSVSSSDVNAYLREL
TGADFTAKDYRTWAGSALALAVLRELHWEPEAEAKRQVVEMVKVVSRQLGNTPAVCRKCY
IHPAVLEGFVQGRLATLPRPRKRKHLKAEEVGLRVFLEHLEQQA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacagcccattgcgcccagacctcgagctgccaccggagttgcactatgtcgac
gatagccagcccgggatcagccgccggaaacgccgcggcactttcgtctacttcgacccg
cagggccagcgcatcgacgaccgcgagcagatccagcgcatcaacgccctggccgtgccc
ccggcctataccgacgtgtggatctgcgccgacccgcaaggccacctgcaagccaccggc
cgcgacgcccgcgggcgcaagcagtaccgctatcacccacgctggcgcgaggtgcgcgac
gccgacaagtattcgcgcctgctgcagttcggcaccgccctgccgtccttgcgccggcgc
ctggaagccctgctcgcggcccccggcttcagccgcgacaaagtcatggccacggtcatc
agcctgctcgacgccacgctgattcgcgtcggcaacagccagtacgcccgcgacaaccgc
tcctacggcctgaccaccctgcgcaaccggcacgtggcgatcaaaggcagctcgatcctg
ttccagttccgcggcaagagcggcatcgaacaccaaatcaccgtcaaggacccgcgcctg
gcgcgcatcctcaagcgctgcctggaactgcccgggcagaacctgttccagtacctcgac
gaaaacggcgagcgccacagcgtcagctcctccgacgtcaacgcctacctgcgcgagctg
accggcgccgacttcaccgccaaggactaccgcacctgggccggcagtgccctggccctg
gcggtgctgcgcgagctgcactgggagcccgaggccgaggcgaaaagacaggtggtggaa
atggtcaaggtggtctctcggcaactgggcaatacccccgccgtgtgccgcaagtgctat
atccacccggcggtgctcgaaggcttcgtacagggccgcctggcgacgctgcccaggcca
cgcaaacgcaagcacctgaaggccgaggaagtcggcctgagggtgtttctcgaacatctg
gagcaacaagcctga
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