Pseudomonas sp. MRSN12121: TO66_19985
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Entry
TO66_19985 CDS
T03702
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
psem
Pseudomonas sp. MRSN12121
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psem01002
]
TO66_19985
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psem01011
]
TO66_19985
Peptidases and inhibitors [BR:
psem01002
]
Cysteine peptidases
Family C82
TO66_19985
Peptidoglycan biosynthesis and degradation proteins [BR:
psem01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
TO66_19985
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AJO79430
UniProt:
A0A0C5EBX2
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All DBs
Position
complement(4393658..4395229)
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AA seq
523 aa
AA seq
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MFKKHACYLSLFLLAAPLVATAEDVPVDHAGPVQLLFTRLPAACPGLAAHLDVAALSLLQ
GFYQQQGNQPLWSSGGRSAALRTQLQQLADDGLEPANYHTTAGANSGDALCADLSLSHDY
LQALQDLHYGRLPQARFEPMWHAQPVQPDRQAQVLAIAGPGLQDLPAAFALARPHLEQYQ
SLRQLYARQRQQALPHWQPLASGPLLRPQMQDERVPELARRLFEEGYLSALPHDLGTLYR
DDLVSAVKSFQLSHSLQADGVVGAGTLNELNISPQMRREQLRINLERFRWLAQDMEPDSL
LVNLAAAQLTVYQGGVAVWQTRTQVGRAERQTPLLKSRVTRLTLNPTWTVPPTIFREDKL
PEIRRDQSFLNRQNLQVLDSEGHPLAVEDIDWDNPGNILLRQDAGPRNPLGQMAIRFPNP
FSVYLHDTPSQALFNKGPRAFSSGCVRVEHALQLRDLLVSPAERARTDELLSTGLTHEFR
LATPVPILLTYWTAQADSHGQLSYAPDIYGRDAALLVALGGKP
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaaacacgcatgttacttgagccttttcctgctcgctgcgccgttggtcgcg
actgccgaggatgtcccggtcgatcatgcaggccccgtgcaactgctgttcacccgcttg
ccggcggcctgcccgggcctggcggcgcaccttgatgtggcggccctgagcctgttgcag
gggttctaccaacagcagggcaaccagcctttgtggtcgtcgggcggacgttcggcggca
ctgcgcactcaattgcagcaactggccgacgatggcctcgaacccgccaactaccacacg
acggccggcgctaattcgggggacgccctgtgcgccgacctgagcctcagccacgattac
ctgcaggccctgcaagacctgcattacggacgcctgccgcaggcgcgtttcgagccgatg
tggcatgcccagccggtgcagccggatcgccaggcccaggtgctcgctatcgccgggccg
gggctgcaagatctgccggcggctttcgccctggcccggccgcacctcgagcagtaccag
agcttgcgccagttgtacgcccggcaacgccagcaggcgctgccccattggcagccgctg
gccagcgggccgctgttgcgcccgcaaatgcaggacgaacgcgtgccggaactggcccgg
cggctgttcgaggagggctacctgagcgcgctgccccacgacctcggcaccctgtaccgc
gacgacctggtgagcgcggtgaaaagcttccagttgagccattcgctgcaggccgacggg
gtggtcggggcaggaaccttgaacgagttgaacatcagcccgcaaatgcgccgtgaacag
ctgcgcatcaacctcgagcgtttccgctggctggcgcaggacatggagcccgacagcctg
ctggtcaacctggcggcggcgcaattgacggtctatcagggtggggtggcggtctggcag
acacgcacccaagtggggcgcgccgagcgccagacgcccttgctcaagtcccgggtcacg
cgcctgaccctgaaccccacctggacggtgccgccgaccattttccgcgaagacaagctg
ccggaaatccgccgcgaccagtccttcctcaaccggcagaacctgcaggtgctcgatagc
gagggccaccccctggcggtggaagacatcgactgggacaaccccggcaatattctcctg
cgccaggacgcggggccgcgcaaccccctggggcagatggcgatccgctttcccaacccg
ttctcggtgtacctgcacgacacgccgagccaggcgctgttcaacaaggggccgcgggcc
ttcagctcgggttgcgtgcgagtcgagcatgccttgcaactgcgcgacctgctggtgagc
ccggcggaacgggcgcgcaccgacgagctgctgagcaccgggctgacccacgagttccgg
ctagccacgccggtgccgatcctgctcacctactggacggcgcaggccgacagccatggc
cagctgtcctatgcgccggacatctatgggcgggacgcggcgctgctggtcgccctgggg
ggcaagccgtga
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