KEGG   Pseudomonas sp. MRSN12121: TO66_19985
Entry
TO66_19985        CDS       T03702                                 
Name
(GenBank) peptidoglycan-binding protein
  KO
K21470  L,D-transpeptidase YcbB
Organism
psem  Pseudomonas sp. MRSN12121
Brite
KEGG Orthology (KO) [BR:psem00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:psem01002]
    TO66_19985
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:psem01011]
    TO66_19985
Peptidases and inhibitors [BR:psem01002]
 Cysteine peptidases
  Family C82
   TO66_19985
Peptidoglycan biosynthesis and degradation proteins [BR:psem01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   TO66_19985
SSDB
Motif
Pfam: Scaffold YkuD PG_binding_1
Other DBs
NCBI-ProteinID: AJO79430
UniProt: A0A0C5EBX2
LinkDB
Position
complement(4393658..4395229)
AA seq 523 aa
MFKKHACYLSLFLLAAPLVATAEDVPVDHAGPVQLLFTRLPAACPGLAAHLDVAALSLLQ
GFYQQQGNQPLWSSGGRSAALRTQLQQLADDGLEPANYHTTAGANSGDALCADLSLSHDY
LQALQDLHYGRLPQARFEPMWHAQPVQPDRQAQVLAIAGPGLQDLPAAFALARPHLEQYQ
SLRQLYARQRQQALPHWQPLASGPLLRPQMQDERVPELARRLFEEGYLSALPHDLGTLYR
DDLVSAVKSFQLSHSLQADGVVGAGTLNELNISPQMRREQLRINLERFRWLAQDMEPDSL
LVNLAAAQLTVYQGGVAVWQTRTQVGRAERQTPLLKSRVTRLTLNPTWTVPPTIFREDKL
PEIRRDQSFLNRQNLQVLDSEGHPLAVEDIDWDNPGNILLRQDAGPRNPLGQMAIRFPNP
FSVYLHDTPSQALFNKGPRAFSSGCVRVEHALQLRDLLVSPAERARTDELLSTGLTHEFR
LATPVPILLTYWTAQADSHGQLSYAPDIYGRDAALLVALGGKP
NT seq 1572 nt   +upstreamnt  +downstreamnt
ttgttcaaaaaacacgcatgttacttgagccttttcctgctcgctgcgccgttggtcgcg
actgccgaggatgtcccggtcgatcatgcaggccccgtgcaactgctgttcacccgcttg
ccggcggcctgcccgggcctggcggcgcaccttgatgtggcggccctgagcctgttgcag
gggttctaccaacagcagggcaaccagcctttgtggtcgtcgggcggacgttcggcggca
ctgcgcactcaattgcagcaactggccgacgatggcctcgaacccgccaactaccacacg
acggccggcgctaattcgggggacgccctgtgcgccgacctgagcctcagccacgattac
ctgcaggccctgcaagacctgcattacggacgcctgccgcaggcgcgtttcgagccgatg
tggcatgcccagccggtgcagccggatcgccaggcccaggtgctcgctatcgccgggccg
gggctgcaagatctgccggcggctttcgccctggcccggccgcacctcgagcagtaccag
agcttgcgccagttgtacgcccggcaacgccagcaggcgctgccccattggcagccgctg
gccagcgggccgctgttgcgcccgcaaatgcaggacgaacgcgtgccggaactggcccgg
cggctgttcgaggagggctacctgagcgcgctgccccacgacctcggcaccctgtaccgc
gacgacctggtgagcgcggtgaaaagcttccagttgagccattcgctgcaggccgacggg
gtggtcggggcaggaaccttgaacgagttgaacatcagcccgcaaatgcgccgtgaacag
ctgcgcatcaacctcgagcgtttccgctggctggcgcaggacatggagcccgacagcctg
ctggtcaacctggcggcggcgcaattgacggtctatcagggtggggtggcggtctggcag
acacgcacccaagtggggcgcgccgagcgccagacgcccttgctcaagtcccgggtcacg
cgcctgaccctgaaccccacctggacggtgccgccgaccattttccgcgaagacaagctg
ccggaaatccgccgcgaccagtccttcctcaaccggcagaacctgcaggtgctcgatagc
gagggccaccccctggcggtggaagacatcgactgggacaaccccggcaatattctcctg
cgccaggacgcggggccgcgcaaccccctggggcagatggcgatccgctttcccaacccg
ttctcggtgtacctgcacgacacgccgagccaggcgctgttcaacaaggggccgcgggcc
ttcagctcgggttgcgtgcgagtcgagcatgccttgcaactgcgcgacctgctggtgagc
ccggcggaacgggcgcgcaccgacgagctgctgagcaccgggctgacccacgagttccgg
ctagccacgccggtgccgatcctgctcacctactggacggcgcaggccgacagccatggc
cagctgtcctatgcgccggacatctatgggcgggacgcggcgctgctggtcgccctgggg
ggcaagccgtga

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