Pseudomonas sp. MRSN12121: TO66_24415
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Entry
TO66_24415 CDS
T03702
Name
(GenBank) porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem01501
beta-Lactam resistance
psem02020
Two-component system
Module
psem_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TO66_24415
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TO66_24415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psem02000
]
TO66_24415
01504 Antimicrobial resistance genes [BR:
psem01504
]
TO66_24415
Transporters [BR:
psem02000
]
Other transporters
Pores ion channels [TC:
1
]
TO66_24415
Antimicrobial resistance genes [BR:
psem01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
TO66_24415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AJO80250
UniProt:
A0A0C5EE84
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All DBs
Position
5388010..5389362
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AA seq
450 aa
AA seq
DB search
MRVMKWSMIALAVAAAASTQVATAAPFVSDQAEAKGFVEDAKLNVLLRNYYFNRDNKNGG
NDQKDWTQGIWGNFSSGYTQGTVGVGVDAFGYLALKLDGGDGTGGTGNMSRDSDGDVNKS
QGKAGAAVKFRISKTELKVGDMQPSTSPVFAVGGSRILPQTASGLQLQSSEIKDLDLEGG
HFYSGTSQDSNARNGNLYANYAGVASNSIDYFGGKYGISDNLSASLYGAKLEDIWNQYYA
NLNYTIPMGGDQSLNLDGNIYRTTDTGKAKAGDISNTTFSLAAAFSFLKAHTITVGFQKV
NGDTPFDYIGIGGHDSSKRGSNRGGDSIFLANSIQYSDFNGPNEKSAQIRYDLKMAEYGI
PGLSFMTRYVKGWDIDGTKMDADSPYRLYGYGADGKHHETNFEAKYVVQTGPAKDLSFRV
RQAWHTANADQAEGDIKEFRLIVDYPLSIL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgcactggcggttgcagcagcagccagtactcaa
gtggctacggccgcacctttcgtaagtgaccaggctgaagccaagggtttcgttgaagac
gccaaacttaacgtcttgctgcgtaactattacttcaaccgtgataacaagaatggtggc
aacgaccagaaagactggacccagggtatctggggcaacttcagctccggttacacccaa
ggaactgttggcgtcggtgttgatgcctttggttatctggcactcaaactggacggcggc
gacggcactggcggcactggcaacatgagccgcgactccgacggcgacgtcaacaagagc
cagggcaaagcaggtgcagcggtcaagttccgcatctccaaaaccgagctgaaagtcggc
gacatgcagccaagcacctccccggtgttcgcagtcggtggctcccgtatcctccctcaa
actgccagcggcctccaactgcagagcagcgagatcaaggacctggatctggaaggcggc
cacttctactccggtaccagccaggactccaacgctcgtaacggcaacttgtatgcgaac
tatgccggcgtggcatccaacagcatcgactacttcggcggcaagtacggcatcagcgac
aacctgagcgcatcgctctacggcgccaagctggaagatatctggaaccagtactacgcc
aacctgaactacaccatcccgatgggtggcgaccagtcgctgaacctggacggtaacatc
taccgtactaccgataccggcaaagccaaggctggtgatatcagcaacaccacgttctcc
ctggcagcggcgttctcgttcctgaaggcgcataccattaccgtcgggttccagaaggtc
aatggcgacactccattcgactacatcggtatcggtggccacgactccagcaaacgtggt
tccaaccgtggtggcgactcgatcttcctcgccaactccatccagtactctgacttcaac
ggtccgaacgagaagtccgcgcagatccgttatgacctgaaaatggccgaatacggtatt
cctggcctgagcttcatgacccgttacgtgaaaggttgggacatcgacggcaccaagatg
gacgccgacagcccataccgcctttacggttacggcgcagatggcaaacatcacgaaacc
aacttcgaagccaagtatgttgtccagactggcccagccaaggacctgtcgttccgggtt
cgtcaagcctggcacaccgccaacgccgaccaggccgaaggcgatatcaaagagttccgc
ctgatcgtcgactacccactgtcgatcttgtaa
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