Pseudomonas sp. MRSN12121: TO66_26115
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Entry
TO66_26115 CDS
T03702
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psem
Pseudomonas sp. MRSN12121
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psem03400
]
TO66_26115
Enzymes [BR:
psem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
TO66_26115
DNA repair and recombination proteins [BR:
psem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TO66_26115
Prokaryotic type
TO66_26115
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CAP59_mtransfer
Motif
Other DBs
NCBI-ProteinID:
AJO81830
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All DBs
Position
5754612..5756057
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AA seq
481 aa
AA seq
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MQLIWLRSDLRLHDNTALHAATQRGPTVAVYLLSPGQWLAHDDAPCKVDFWLRNLRQLSS
DLARLNIPLLIREASSWDQAPQALLQLCRQLSVEALHVNEEYGIHESRRDTAVASLLKSQ
GVGFHSYLDQLLFRPGSVLTKSGGYFQVFSQFRKVCYSRLYSALPAQVAAPGAQAALGIP
ADAVPRHVEGFPTPSPQLQALWPAGEEAAQQRLGYFAEARLDHYQAERDLPARPGTSQLS
PYLAAGVLSPRQCLHAALQTNQGEFASGNPGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRDAPDELAAWQQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWRLGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSQRFDSQGTFIR
HWLPELAGLDAKDIHNPAAMGGLFGVPGYPAPMVDLGMSRERALAAFKNLPSRVDARGGQ
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ctgcaattgatctggctgcgcagcgacctgcgcctgcacgacaacaccgcgctgcatgcc
gcgacccagcgcgggccgacggtggccgtctatctgctgagccccgggcaatggctcgcg
catgacgacgcgccgtgcaaggtcgacttctggctgcgcaacctgcgccagctgagcagc
gacctggcgcggttgaacatcccgctgctgattcgtgaagcatcgtcctgggaccaggcg
ccccaggccttgctccagctgtgccggcaactgtccgtcgaggcgctgcacgtcaacgag
gaatacggcatccatgaaagccgccgcgacaccgcggtggccagcctgctgaaaagccag
ggcgtggggtttcacagctacctcgaccaactgctgttccggcccggcagcgtgctgacc
aaaagcggcggttacttccaggtcttcagccagtttcgcaaggtctgctacagccggctg
tacagcgccctgccggcgcaagtggcggcgcccggggcacaagcggcgctggggataccc
gccgatgcggtgccgcggcatgtcgaggggttccccacgcccagcccacagctgcaagcg
ctctggccggccggcgaagaggccgcgcaacagcgccttgggtatttcgccgaggcccgg
ctcgaccactaccaggccgaacgcgacctgccggccaggcccggcaccagccagctgtcc
ccctacctggcggccggcgtgctgtcgccgcgccaatgcctgcacgccgccctgcagacc
aaccagggcgagttcgccagcggcaaccccggcgcggtcacctggatcaacgagttgctc
tggcgcgagttctataaacacatcctggtgggctacccgcgggtatcccggcatcgcgcg
ttccgcccggaaaccgaggccgtggcctggcgcgacgcgcccgatgaactggcggcctgg
caacaggcccgtaccggcttgccgatcatcgatgccgccatgcgccagttgctggaaacc
ggctggatgcacaaccgcctgcggatggtcgtggcgatgttcctgaccaaaaacctgctg
atcgactggcgcctgggcgaacgatttttcatgcgccacctgatcgatggcgacctggcg
gcaaacaacggcggctggcagtggagttcgtccaccggcaccgactcggcgccctacttc
cgtatcttcaaccccttgagtcaatcgcagcggttcgacagccagggcaccttcatccgc
cactggctgccggaactggcggggctggacgccaaagatatccacaacccggcggccatg
ggcgggctgttcggcgtacccggctacccggcgccgatggtcgatctgggaatgtcgcgc
gaacgcgccctggcggcgttcaagaacctgccttcgcgagtcgacgccaggggcggacag
gactag
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