Pseudomonas sp. MRSN12121: TO66_27170
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Entry
TO66_27170 CDS
T03702
Name
(GenBank) diguanylate phosphodiesterase
Organism
psem
Pseudomonas sp. MRSN12121
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
dCache_1
Robl_LC7
Motif
Other DBs
NCBI-ProteinID:
AJO80767
UniProt:
A0A0C5ERW1
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Position
5974916..5978755
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AA seq
1279 aa
AA seq
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MSNATPPSSLRAPAPASGSPLRGTLKGVLATLVLLLLALLFWQLLDQLQQTRKDQRQHAI
DYNADLAEHISLNLALNAQIALNLLPIVELPENTDQQQLLLKKLQLSLPELRAIALLDAK
GQVISSSDASAVDNAWFADLTSRSRGQRYYYSDVIGSPQAQLLLQQPGSGAKRYWVLQLA
PGFIQSLSLGPDQGTQPIWAIENRLSHKTLGRDNGSQAPVTTEEVANSVLVAPLGNSDWQ
LRGLFDERAVIEQLLPAFIAKCLLGLAFSLLPVIALLNMRRRQRQLHEGRRRYQDIFEGT
GVALCVLDISGLPAFLDKAQLHDSEQLKRWLENNPQQRQSLLEELRVTEVNQVALRLLNV
DSCEQAWKLLIEGSPLNSSAIGNQLLETVINQHRQLELEIRLCDAQGNDQHLWLVLRLPE
DPADYRAVILSISDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVVSQRMIFSNHHL
GQTLGYNKTELHQMGEYFWEILLHPEDADLYHRLRQEQRHGGYLQLLQCHLRFRHRSGQW
RCFDIREQALARDKYDQVTRIIGVAKDITDQIEASESLRDSERRYRMLAESISDVIFSTN
SKMALNYVSPSVQSVLGYDVEWIFQNGWQSTIANPQQLTGIYTLMERIGKALDKPEQLAQ
LRNQVQTQLFLFDCLRADGRKIPIELRLVLVWDEHGAFEGVLGVGRDISQQRRAEKDLRM
AATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVAQVLDQLPNMLTVDEQQEAHLRYV
LKQLHQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRI
HRLAYYDALTHLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLDRFKPINDSLGHAAGDR
MLKDMATRLLDCVDDDDTVARMGGDEFTLLLQPRASREIALNRAIHVAEQILASLVRPFV
LEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALER
LELESDLRHALEQQEFILYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEEL
GLVVDVGDWVIGEACRQLKAWHQAKVRVPKVSVNISARQFSDGQLGTRIATILKDTGLPP
ACLELELTESILMREVSEAMHILDGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDR
TFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRP
MPANSFEGQFSNDALFMFD
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaatgccaccccgccctcttccctgcgcgcgcctgcgcctgcgtccggctcgccg
ttgcgcggcaccctgaaaggtgtgctggcgaccctggtcctgctgctgctcgccctgctg
ttctggcaactgctcgaccaactgcaacaaacccgcaaagaccagcgccaacatgcgatc
gactacaacgccgacctggccgagcacatcagcctcaacctggcgctgaacgcccagatc
gccctgaatctgctaccgatcgtcgagctgccagaaaataccgaccagcagcaactgctg
ttgaaaaagctgcaattgtccctgccggagctgcgggccatcgccttgctggacgccaag
ggccaggtcatcagcagcagcgatgccagcgccgtggacaacgcatggttcgccgacctg
acctcccgcagccgtggccagcgctattactacagcgacgtcatcggcagtccccaggca
caactgctgctccagcagcccggcagcggcgccaagcgttactgggtgctgcagctggcc
ccgggcttcatccagtccctgagcctgggccccgatcagggcacccagccgatctgggcc
atcgaaaaccgcctgagccacaagaccctgggtcgcgacaacggcagccaggccccggtg
accaccgaggaagtagccaatagcgtgctggtggcgcccctgggcaacagcgactggcaa
ttgcgtggcctgttcgacgagcgcgcggtgatcgagcaactgttgccggcattcatcgcc
aaatgcctgctcgggctggcgttttccctgctgccggtgattgcgctgctgaacatgcgc
cggcgccaacgccagttgcacgagggccggcgccgctaccaggacattttcgaaggcacc
ggggtggccctctgcgtgctggatatctccggcctgccggcgtttctcgacaaggcgcag
ttgcatgacagcgagcagctcaagcgctggctggaaaacaacccacagcagcgccagtcg
ctgctggaagaactgcgtgtcaccgaggtcaatcaggtggccttgcggctgctcaacgtc
gactcctgtgagcaggcctggaagctgctgatcgaaggcagcccgctcaacagcagcgcc
atcggcaaccagctgctggagaccgtgatcaaccagcatcggcagttggagctggaaatc
cgcctctgcgacgcccagggcaacgaccagcatctgtggctggtgctgcgcctgccggaa
gatcccgccgactatcgagcggtgatcctcagcatcagcgatatcaccagccgcaagctc
atcgagctgtcattgctggagcgcgaaggcttctggtcggatgtggtgcgcaccgtgccg
gaccacctgtatgtgcaggacgtcgtcagccagcggatgattttcagcaaccaccacctg
ggccagaccctcggctacaacaagaccgaactgcaccagatgggcgagtacttctgggaa
atcctcctgcatccggaagatgccgatctgtaccaccgcctgcgccaggaacagcgccat
ggcggctacctgcaactgttgcagtgccacctgcgctttcgccaccgcagcggccagtgg
cggtgcttcgatatccgcgagcaggccctggcgcgggacaagtacgaccaggtcacgcgc
atcatcggcgtggccaaggacatcaccgaccagatcgaggccagcgaatccctgcgtgac
agcgagcggcgctatcgcatgctcgccgaaagcatcagcgacgtgattttctccaccaac
agcaagatggccctcaactatgtcagcccttcggtacagtcggtgctgggctatgacgtg
gagtggattttccagaacggctggcaatcgaccatcgccaacccgcagcagctgaccggc
atctacaccctgatggagcggatcggcaaggccctggacaagcccgagcaactggcgcaa
ctgcgcaatcaggtgcagacccagctgttcctgttcgactgcctgcgggccgatggccgc
aagattccgatcgagttgcgcctggtgctggtctgggacgagcacggcgccttcgaaggc
gtgctcggggtcggccgcgatatcagccagcagcgccgcgcggaaaaagacctgcgcatg
gccgccacggtattcgagcattcgacctcggcgatcctgatcaccgacccggccggctac
atcgtccaggccaacgaggcgttcagccgggtcagcggctacgcggtggcccaggtgctc
gaccagttgccgaacatgctcaccgtcgacgaacaacaggaagcccacctgcgctatgtg
ctcaagcagttgcaccagcacagcacctgggagggcgaggtctggctcaagcgccgtaac
ggcgagcactacccggcctgggtcggcattaccgcggtgctcgacgacgaaggcgacctg
gccagctatgtgtgcttcttcaccgacatcagcgaacgcaaggccagtgaacagcgcatc
caccgcctggcctactacgacgccctgactcacctgcccaaccgcacgctgttccaggac
cgcctgcacaccgcgctgcaatcggcggagcggcagaagtcctgggtggtgctgatgttc
ctcgacctggaccgtttcaagccgatcaacgactccctgggccatgccgcgggcgaccgc
atgctcaaggacatggccacccgcctgctcgactgcgtcgacgatgacgacaccgtggcg
cgcatgggcggagacgaattcaccctgctcctgcaaccgcgggccagccgtgagatcgcc
ttgaaccgggcgatccacgtcgccgaacagattctcgccagcctggtgaggccgttcgtg
ctcgaaggccgtgaattcttcgtcaccgccagtatcggcatcgccctgagcccccaggac
ggcaacgagctgagccagttgatgaagaacgccgacaccgcgatgtaccacgccaaggag
cgcggcaagaacaacttccagttctaccaggccgacatgaacgccagcgccctggagcgc
ctggaactggaaagcgacctgcgccacgccctggagcagcaggaattcatcctctactac
cagccgcaattcagcggcgacggcaagcgcctgaccggcgccgaggccctgctgcgctgg
cgccatccacggcgcggcctggtgccgccgggggacttcatcccggtgctcgaggagctg
gggctggtggtggatgtcggcgactgggtgatcggcgaagcctgtcgccagctcaaggcc
tggcaccaggccaaggtccgggtgccgaaggtgtcggtgaacatctcggcccggcagttc
tccgatggccagctgggcacgcgcatcgccaccatcctcaaggacaccggcctgccgccg
gcctgcctggagctggaactgaccgaaagtatcctgatgcgcgaagtcagcgaggcgatg
cacattctcgacgggctgaagaacctcggcctgagcatcgcggtcgacgacttcggcacc
ggctattcatcgctgaactacctcaagcagttccccatcgatgtgttgaagatcgaccgc
accttcgtcgatggcctgccctccggcgagcaggacgcgcagatcgcccgcgccatcatc
gccatggcccacagcctgaacctggcggtgatcgccgagggcgtggaaacccatgagcaa
ctggacttcctgcgcgagcacggctgcgacgaagtgcagggctacctgttcggccgcccg
atgccggccaacagtttcgaagggcaattcagcaacgacgcgctgttcatgtttgattag
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