Pseudomonas sp. MRSN12121: TO66_28900
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Entry
TO66_28900 CDS
T03702
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem03030
DNA replication
psem03430
Mismatch repair
psem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TO66_28900
03430 Mismatch repair
TO66_28900
03440 Homologous recombination
TO66_28900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psem03032
]
TO66_28900
03400 DNA repair and recombination proteins [BR:
psem03400
]
TO66_28900
Enzymes [BR:
psem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TO66_28900
DNA replication proteins [BR:
psem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TO66_28900
DNA repair and recombination proteins [BR:
psem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TO66_28900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AJO81088
LinkDB
All DBs
Position
6331921..6332628
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AA seq
235 aa
AA seq
DB search
MSLFAWLRPASAPLDATQQRRRERLPGAPALGECSLREQRWVVLDLETTGLNLNRDQVLS
IGAVVIEDGAIDFSQQFERTLQRSEHKLSPSVLIHGLGPSAIAAGSDPVEALLDFMEFVG
DSPLLAFHAPFDQHMLGRALKDSLGYRLQHPFLDVAAMAPLLCPQASIREAGLDDWMNHF
KLHVGERHHAAADALATAELALILFSRARQQQIHSPLNLQQRLNQWKRRQQTHSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcgcctggctgcgcccggccagcgcgccgctcgacgctacccagcaacgg
cgccgcgagcgcctgcccggtgctccggcactgggcgagtgcagcctgcgcgagcagcgc
tgggtggtgctggacctggaaaccacggggctcaacctcaaccgcgatcaggtgctgtcc
atcggggcggtggtcatcgaagacggtgccatcgatttcagccagcagttcgagcgcacc
ctgcaacgcagcgagcacaagctcagccccagcgtactgatccatggcctggggcccagc
gcgatcgccgccggcagcgacccggtggaggccttgctggatttcatggagttcgtcggc
gacagcccgctgctggccttccatgcgccgttcgaccagcacatgctcggccgcgccctg
aaggacagcctgggttatcgtctgcagcatcccttcctcgacgtcgccgccatggccccg
ctgctatgcccgcaggcgtctatccgcgaagccgggctggatgactggatgaaccacttc
aagctgcacgtcggcgagcgccaccatgccgccgccgatgccctggccacagccgaactg
gcgctgatcctgttcagccgggcccgccagcagcagatccacagcccgctgaacctgcaa
cagcggctcaaccagtggaaacgccgccagcagacccactccttctga
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