KEGG   Pseudomonas sp. MRSN12121: TO66_30970
Entry
TO66_30970        CDS       T03702                                 
Name
(GenBank) type VI secretion protein
  KO
K11893  type VI secretion system protein ImpJ
Organism
psem  Pseudomonas sp. MRSN12121
Pathway
psem02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:psem00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    TO66_30970
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psem02044]
    TO66_30970
Secretion system [BR:psem02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   TO66_30970
SSDB
Motif
Pfam: T6SS_VasE STN1_2
Other DBs
NCBI-ProteinID: AJO81483
LinkDB
Position
complement(6779799..6781130)
AA seq 443 aa
MNVHKVIWQEGMLLRPQHFQHNDRYYDYQMKTRTQLLGSYCWGFLGLEIDLQFLNMGKLV
ISQASGILPDGSLFELGGNTEPLALDIPPNTGNTPVYLALPLVTGNHIESRRPEQSDVLA
RYTTYEAEVADSNAGDDSSSQVSCARPDFRLLLGEQQSDQAYVKLKLCEVLDTTPDGVIS
LDPDFVPTFIHAHASSYLLSCLKEVISMLSHRGDTIADRIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLGLEQVHPEELYRTLLTMLGDLATFASDSKRPRLDSRYQHSDQGASFRKL
MDAIRQVLSMVLEQHAIELVLQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRHR
LPAHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaacgtgcataaagtcatttggcaggaaggcatgctgctgcgcccgcagcacttccag
cacaacgatcgctactacgactaccagatgaagacccgcacccagttgctgggcagctat
tgctgggggttcctggggctggagatcgacctgcagttcctcaacatgggcaagctggtg
atcagccaggcgtccggcatcctgcccgacggcagcctgttcgagctgggcggcaacacc
gagccgctggccctggacattccgccgaacaccggcaataccccggtctacctggccttg
ccgctggtcaccggcaaccacatcgagtcgcgccgtccggagcagtccgacgtgctggcg
cgctacaccacctacgaggcggaagtggccgactccaacgccggcgacgactccagcagc
caggtcagctgtgcacggccggatttccgcctgctgctcggcgagcaacagagcgaccag
gcctacgtcaagctcaagctctgcgaagtcctcgacaccacgcccgacggagtgatcagc
ctcgacccggacttcgtgccgaccttcatccatgcccacgcctcgagctacctgctgtcg
tgcctgaaggaagtgatcagcatgctcagccatcgcggcgacaccatcgccgaccggatc
cgctccaacggcaaggtcggcggcgccgaagtcggcgacttcatgatgctgcaactgatc
aaccgcaccgagctgctgctgcgccactacctgggcctggagcaggtgcacccggaagag
ctgtaccgcacgctgctgaccatgctcggcgatctggcgaccttcgccagcgacagcaag
cgaccgcgcctggacagccgttaccagcacagcgaccagggcgcgagcttccgcaagttg
atggacgcgatccgccaggtgctgtcgatggtgctcgaacagcacgccatcgagctggtg
ctgcaggcgcgccagtacgggatcatcgtgtcgccgttgcacgaccacaagctgctgggc
tcggcctcgttcgtcctggccgccagtgccaactgcgactccgaagaactgcgccatcgc
ttgccggcgcacctcaaggtcggcccggtggagcgcattcgccagctggtcaacctgcac
ctgcccgggatcaaggtcaaacccttgccggtggccccgcggcagatcgcgttccactcc
aacaaaacctatttcatcctcgaactcagttccgaagacctggcgcaactggagcgttcc
ggcggcttcgccttccacgtgtccggcgaattcgccgagcttgaactgaaattctgggcc
atcaggaactga

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