KEGG   Pseudomonas sp. MRSN12121: TO66_30990
Entry
TO66_30990        CDS       T03702                                 
Name
(GenBank) Fis family transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
psem  Pseudomonas sp. MRSN12121
Brite
KEGG Orthology (KO) [BR:psem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psem03000]
    TO66_30990
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psem02044]
    TO66_30990
Transcription factors [BR:psem03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    TO66_30990
Secretion system [BR:psem02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   TO66_30990
SSDB
Motif
Pfam: Sigma54_activat AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 HTH_30 AAA_2 AAA_16 HTH_50 AAA_7
Other DBs
NCBI-ProteinID: AJO81487
LinkDB
Position
complement(6783086..6784603)
AA seq 505 aa
MFTRVPQPLIYAEALLAQFASLSRAADGAALLGDFVRGVAGLSGCELSQLYLLDATHTRL
GLSAECLGGLLQPREAASLPADYNGEQLLQFALCQNRVVSLVGLSGSLHETSFLPVRDTP
WQSLLCVPLVNPQKAVEGLLLCASREHVDLQVFADSMGQLGSFVLGQLHLLQRLRRPVGE
TPPVASSPVGASGYGLIGNSAAMRQTYQLISKVLHSPYTVLLRGETGTGKEVVARAIHDY
GPRRSQAFIVQNCAAFPENLLESELFGYRKGAFTGADRDRPGLFDAANGGTLLLDEIGDM
PLSLQAKLLRVLQEGEIRPLGSNDTHKIDVRIIAATHRDLAVLVSEGKFREDLYYRLAQF
PIELPALRQRDGDILALARHFADKACAFLQRDPVSWSDTALNHLSGYTFPGNVRELKGLV
ERAVLLCEGGELLAEHFSLSSEALPEEPGLNLRERLEKVERHLLLDCLRKNDGNQTLAAR
ELGLPRRTLLYRLGRLNINLGDFEG
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgttcactcgtgtaccgcaaccgctgatctacgccgaggcgctgctggcgcaattcgcc
agcttgtcgcgggcggccgacggcgccgcgctgctgggcgatttcgtgcgcggggtggcc
gggctcagcggctgcgagctgagccagctgtacctgctggacgccactcatacccggctg
ggcctgagcgccgagtgcctgggcggcctcctgcaaccgcgggaagcggcgagcctgccg
gcggattacaacggtgaacaactgctgcagttcgccctgtgccaaaaccgcgtggtgagc
ctggtgggcttgagcggcagcctgcacgaaaccagtttcctgcccgtgcgcgacacgccc
tggcaatcgctgttgtgcgtgccgctggtgaacccgcaaaaggccgtcgagggcctgctg
ctgtgtgccagccgcgagcacgtcgacctgcaggtctttgccgactccatgggccaactg
gggtcgttcgtgcttggccagctgcacctgctgcaacgcctgcgtcgtccggtgggcgaa
acgccgccggtggccagctcgccggtgggtgccagcggctatgggctgatcggcaacagc
gcggccatgcgccagacctaccagctgatcagcaaggtgctgcacagcccctacaccgta
ttgctgcgcggcgagaccggcaccggcaaggaagtggtggcgcgggccatccacgactac
ggcccgcggcgctcccaggcgttcatcgtgcagaactgcgcggcgttcccggagaacctg
ctggaaagcgagctgttcggctatcgcaagggcgccttcaccggcgccgaccgtgatcgt
ccggggctgttcgacgcggccaacggcggcaccctgttgctcgatgagatcggcgacatg
cccctgtcgctgcaggccaagctgttgcgcgtgttgcaggagggcgagatccgtccgctg
ggctccaacgacacccacaagatcgacgtgcgcatcatcgccgcgacccaccgcgacctg
gcggttctggtcagcgaaggcaagttccgcgaggacctgtactaccgcctggcgcagttc
ccgatcgagctgccggccctgcgccagcgcgacggcgacatcctcgccctggcccggcac
ttcgccgacaaggcctgcgccttcttgcagcgcgacccggtgagctggtcggacaccgcc
ctcaatcacctgtcgggctacaccttcccgggcaacgtgcgcgaactcaagggcctggtc
gagcgcgcggtattgctgtgcgagggcggcgagctgctggccgagcatttttccctgagc
agcgaggcgctgccggaggagcccgggctgaacctgcgcgagcgcctggaaaaggtcgag
cgtcacctgttgctcgactgcctgcgcaagaacgacggcaaccagaccctggcggcccgc
gaactggggctgcccaggcgcacgctgctgtaccggctggggcggctgaatatcaatctt
ggcgacttcgagggatag

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