Pseudoalteromonas sp. NC201: PNC201_02605
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Entry
PNC201_02605 CDS
T05464
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
psen
Pseudoalteromonas sp. NC201
Pathway
psen00470
D-Amino acid metabolism
psen00550
Peptidoglycan biosynthesis
psen01100
Metabolic pathways
psen01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PNC201_02605 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PNC201_02605 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PNC201_02605 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psen01011
]
PNC201_02605 (ddlB)
Enzymes [BR:
psen01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PNC201_02605 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
psen01011
]
Precursor biosynthesis
Amino acid ligase
PNC201_02605 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
ATP-grasp
GARS_A
ATPgrasp_YheCD
DUF7388
Motif
Other DBs
NCBI-ProteinID:
AUJ68858
UniProt:
A0A2K9JU69
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All DBs
Position
600239..601150
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AA seq
303 aa
AA seq
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MSSQFGKVAVLLGGSSAEREVSLKSGNAVLNAFVNQGIDAIAFDPAERNLWQLKDLGVDR
VFIALHGRGGEDGTIQGALEFMGIPYTGSGVLGSALAMDKVRCKHLFQSAKLSTAPYAVV
SKETGFDAKALIAEFGKVMVKPSHEGSSIGMAQADSEENLTAALNNAFKFDDQVLVEQWI
TGREFTVSMLAKEALPVIEMRTPRGFYDYEAKYQVNSTEYYCPADISAAHTEQLQVMAKH
AFELVGATGWGRVDAMQDEQGHFYLLEVNTVPGMTEKSLVPMAAKATGVSFEQLVVRILE
QTL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcagtttggaaaagtagccgtattacttggcggtagttcagcagagcgagag
gtgtcgctaaagtctggtaatgcagtgctaaatgccttcgttaatcaaggtatagatgcg
attgcttttgatccagcagaacgtaatttatggcaacttaaagacctaggtgtggatcgc
gtattcattgcactgcatggccgtggcggtgaagatggtactattcaaggtgcgcttgag
tttatgggaataccatatacaggaagcggtgtacttggtagtgcgcttgcgatggataaa
gtccgctgtaagcatctatttcagtctgccaagttaagtacggcaccttatgctgtcgta
agcaaagagacgggttttgatgctaaggcgctaatcgctgagtttggcaaagtcatggta
aagccaagtcacgaaggctcaagcataggtatggctcaggcagacagcgaagaaaacctg
actgcggcattaaataatgcctttaagtttgacgatcaagttctcgttgaacaatggatc
actggacgcgagtttaccgtgtctatgctcgctaaagaggcattgcctgttattgaaatg
cgtacgcctcgtggtttttacgattatgaagcgaaataccaagtcaacagtaccgagtat
tattgtccggcggatattagcgctgcacacactgagcaattacaagtgatggcaaagcac
gcttttgaattggttggtgccactggttggggacgtgttgacgccatgcaagatgagcaa
ggtcatttctatctactcgaggtaaatactgtacctggtatgactgaaaagtcgttggtg
ccgatggcagcaaaagcaacgggtgtaagttttgaacaattagttgttcgcattttggag
caaacgctttaa
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