Pseudoalteromonas sp. NC201: PNC201_04240
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Entry
PNC201_04240 CDS
T05464
Name
(GenBank) hypothetical protein
KO
K04485
DNA repair protein RadA/Sms
Organism
psen
Pseudoalteromonas sp. NC201
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psen03400
]
PNC201_04240
DNA repair and recombination proteins [BR:
psen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PNC201_04240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
DUF7125
SLFN-g3_helicase
AAA_22
nSTAND_NTPase5
Rad51
AAA_16
RecA_N
AAA_14
AAA
ABC_tran
Zeta_toxin
GvpD_P-loop
Viral_helicase1
DUF6549
NTPase_1
KdpD
AAA_24
T2SSE
AAA_33
nSTAND3
AAA_19
CSS-motif
PAXNEB
cobW
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AUJ69168
LinkDB
All DBs
Position
1052615..1053985
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AA seq
456 aa
AA seq
DB search
MAKKKTAFVCSDCGAEFARWQGQCSECKAWNTVTEFRVPSAKSVPQGGSTSGYAGLVEAK
VQTLDEVNLEQLPRFSTGFKEFDRVLGGGVVPGSAILIGGSPGAGKSTVLLQTMCRLAET
MNTLYVTGEESLQQVAMRATRLGLPTNKLKTLAETNVETICQLALREKPSIMVIDSIQVM
HMSDIQSAPGSVSQVRESAAYLTRFAKTNQVAIIMVGHVTKDGTLAGPKVLEHCIDCSIL
LEGSADSRFRTLRGNKNRFGAVNELGVFAMTSQGLKEVNNPSAIFLNRGEAQTPGSLVMV
IWEGTRPLLVEVQALVDYSQLANPRRVTVGLEQNRLAMLLAVLHRHGGLQVSDQDVFVNV
VGGVKVTETSADLALIAALVSSFKNQTLDRQLVVFGEVGLGGEIRPVPSGQERLREASKH
GFTRAIVPKANKPKENIEGMEIVAVSSLSEALEALF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagaaaacagcatttgtatgtagcgattgtggtgccgaattcgcgcgttgg
caaggccaatgctcggagtgtaaggcatggaataccgtaacggagtttcgcgttccgtca
gcaaaatcggtccctcaaggcggttcaacgtcaggctatgccggccttgttgaagctaaa
gtacaaaccttagatgaagttaacctagagcagttaccgcgattctcaactggctttaaa
gagtttgaccgtgtccttggtggtggagttgtaccgggaagtgcaatattaatcggtggt
agccccggcgctggtaagagtacggtgctgctgcaaaccatgtgtcgccttgccgaaacc
atgaacactttgtatgtcaccggtgaagagtcgctgcaacaagttgccatgcgtgcgaca
cgattggggctgcctacaaataagttaaaaacactcgcagaaaccaatgttgagacgatt
tgccagctcgcacttcgtgaaaaaccaagcattatggtcatcgattcgattcaagtaatg
catatgagtgatattcaatctgcaccggggtcggtttctcaagtacgtgaaagcgcggcc
tatttgacgcgttttgccaaaaccaatcaggtcgccattatcatggtgggacacgtaact
aaagacggcacacttgccggccctaaggtgctggagcattgtattgactgctctatttta
ctggaaggcagtgccgacagccgctttagaacattgcgtggcaataaaaaccgttttggt
gctgtaaacgagttgggtgtgtttgcgatgacaagccaaggtctaaaggaagtaaacaat
ccttcggccattttcttaaatcgtggtgaagcgcaaacaccaggctcattagttatggtt
atttgggaaggcacgcggccactccttgtggaagttcaagcgctagtcgactattcacag
ctcgccaacccgcgtcgcgtcactgttggtttggaacaaaatcgtttagccatgttactt
gcggtattgcatcgtcacggcggtttgcaggtgtcggatcaagatgtgtttgtaaacgtc
gtaggcggtgtcaaagtgaccgaaaccagtgctgatttagccttgatagctgcactggtt
tcaagctttaaaaatcaaacgttagacaggcagctggtggtatttggtgaggtgggtctt
ggtggtgagatccgcccagtgccaagtgggcaagagcgattgcgtgaagcgtccaagcat
ggatttacaagagcaattgtaccaaaagcaaataaaccaaaagaaaatattgaagggatg
gaaattgttgccgtctctagcctcagcgaagcgcttgaggcacttttttaa
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